| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2269 |
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| Symbol | |
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| ID | 6355292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2494456 |
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| End bp | 2496126 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642669860 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001944271 |
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| Protein GI | 189347742 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.856074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCATG CGAAGCTTCA AGATCTGCTG TCAGGATTAA TCACTTCATG GGAGAGTGAG
GTCGTCGAAT TCAAGCAAGC AGGAAAAGAC TATTCGACCG ACAGAATCGG TGAGTATTTT
TCTGCTCTTG CGAATCAGGC AAATTTGCTG GGCCTTGAAA AAGCCTGGTT AGTGTTTGGC
ATTAACAATA AAACCAGATC AATAGTTGGT TCGGATTACA GGCTTGAACC AGAGCGTTTG
CAGGGAACCA AAATGCAGAT GGCGGAAAAT ACCGAGCCGA GCCTGACCTT CCGAAATATT
TATGAGTTGC AAAACGAAGC TGGGCGGGTA GTCATGTTTG AAATTCCTGC AGCGCCTCGT
GGACTACCAA TTGCATGGAA AGGACATTAC TATGCTCGTG CGGGTGAGAG TCTGACTCAT
TTGGGGCTTG ATAAGCTTGA TGAAATCCGC CAGCAAACCC GCTTGACAGA TTGGTCAGCA
CAGGTTGTTT CTGACGCGAC CGTGGCTCAT CTGGATGAAA CGGCGTTGAC AAGAGCAAAA
GAGGCTTTTG CCCGTAAATA TGCAAACAGG TTTTCCGAGG AGGCCGTTTA TGAGTGGTCG
ATTGAAACCT TTCTGGATCG AGCAAAATTG ACACAGGATG GCCGAATTAC ACGTGCAGCA
CTTCTCTTGT TGGGAAAAGC GGAAGCATCT TATCTGCTCA GTCCGCATCC GGCACAGATG
ACATGGAAAC TTGAAGGCAG GGAGCGGGCT TATGAGCATT TCGGACTGCC TTTTTTTCTC
AATACCTCAG AGATTTACAG GAAAATTCGC AACATTCAGC TTCGCATTCT CCCGGAAGAT
GCCCTGCTGC CGGTAGAAGT GTCCAAGTAC GATCAGAAAA TCATACTGGA AGCTCTCCAT
AACTGTATTG CGCATCAGGA CTACACTCGA AATGGTCGAA TCATTGTTAC TGAGCAGCCG
GATAAACTGA TTTTCGAAAA TGAAGGCAGC TTTTTTGAAG GCAAGCCAGA AGATTACGTT
ACCGGTAACA AGACCCCTCG TTGCTATAGA AATGCATTTT TAGCGCGAGC CATGGCTGAA
CTGAATATGA TCGATACCAT GGGATATGGG ATTTATGAGA TGCATCTGGG TCAGGCCAAG
CGCTATTTTC CGATGCCGGA TTACGACCTG ACTGATCCAA CCGTTGTGAA AATAACGATA
TATGGAACGG TTGTCGACCC TGCGTACAGC CGAATGCTAA TCCATAAAAC AGATCTTTCG
TTAACGGATA TTCTCTGGCT CGACCGTGTC CAGAAAAAAC TACCGATACC AAAAGCTGCC
GTACAATATC TTCGTCGTAA AGGATTGATC GAAGGGCGAT TGCCTAACAT TTACGTGTCT
GCAGCAGTCG CACAGGCTAC GTCAAGAAAG GCTGAGTACA TTCGGACCAG GGCACAGGAT
GATGCTTTTT ATTCAAAACT GATCATGGAT TATCTGAGCA AGTTCGGTAA GGCGTCACGG
GAAGAGATCG ATAAATTGCT TTTGGCAAAA TTAAGTGATG GTTTGAATGA TGAGCAGAAA
CGTAAAAAAG TGGCTAATCT ACTATCCAAT CTCCGTCGTT CCGGGCGTAT TCATAATACT
GGACCAAGGA AATCTCCTAT CTGGAGAGGT GCAGATAAGA TTGCAGAATA A
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| Protein sequence | MGHAKLQDLL SGLITSWESE VVEFKQAGKD YSTDRIGEYF SALANQANLL GLEKAWLVFG
INNKTRSIVG SDYRLEPERL QGTKMQMAEN TEPSLTFRNI YELQNEAGRV VMFEIPAAPR
GLPIAWKGHY YARAGESLTH LGLDKLDEIR QQTRLTDWSA QVVSDATVAH LDETALTRAK
EAFARKYANR FSEEAVYEWS IETFLDRAKL TQDGRITRAA LLLLGKAEAS YLLSPHPAQM
TWKLEGRERA YEHFGLPFFL NTSEIYRKIR NIQLRILPED ALLPVEVSKY DQKIILEALH
NCIAHQDYTR NGRIIVTEQP DKLIFENEGS FFEGKPEDYV TGNKTPRCYR NAFLARAMAE
LNMIDTMGYG IYEMHLGQAK RYFPMPDYDL TDPTVVKITI YGTVVDPAYS RMLIHKTDLS
LTDILWLDRV QKKLPIPKAA VQYLRRKGLI EGRLPNIYVS AAVAQATSRK AEYIRTRAQD
DAFYSKLIMD YLSKFGKASR EEIDKLLLAK LSDGLNDEQK RKKVANLLSN LRRSGRIHNT
GPRKSPIWRG ADKIAE
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