Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2214 |
Symbol | rplF |
ID | 6355236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2449363 |
End bp | 2449902 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642669805 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_001944217 |
Protein GI | 189347688 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000000375197 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAGAA TAGGAAAAAT GCCGATATCC CTGAGCAATC AGGCGAAGAT AGAGATCAGT GATGCCAATG TAAAGGTGAC CGGCCCGAAA GGTACACTCG AGCAGGCTCT GGTTGCACAG GTAACCCTGC AGGAGGAGAA CGGCGTTGTT ACGGTGCAGA GGGTTGACGA GACCAAAAAG TCCAAAGCTA TGCACGGTCT TTACAGGATG CTTATCAGCA ATATGGTTGA GGGTGTCACA AAAGGATTTA CCAGAAAACT CGAGATTGCC GGTGTCGGTT ATCGCGCAGA GCTTAAAAAC GATCTCCTGG CTCTTACGCT GGGATATTCG CATATGATTT ATTTCAAGGC TCCGGACAGC ATCAAAATTG AGGTGCCCGA CCAGACCACT ATTCTTATCA GCGGTATTGA CAAAGCCCTT GTTGGTCAGG TTGCCGCAAA AATACGTTCG TTCCGCAAGC CTGAGCCGTA CCGAGGCAAA GGTATCAAGT ACGAAGGTGA GGTGATCCGC CGCAAGGAAG GTAAGGCAGC CGGTAAGTAA
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Protein sequence | MSRIGKMPIS LSNQAKIEIS DANVKVTGPK GTLEQALVAQ VTLQEENGVV TVQRVDETKK SKAMHGLYRM LISNMVEGVT KGFTRKLEIA GVGYRAELKN DLLALTLGYS HMIYFKAPDS IKIEVPDQTT ILISGIDKAL VGQVAAKIRS FRKPEPYRGK GIKYEGEVIR RKEGKAAGK
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