Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_2182 |
Symbol | |
ID | 6355976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 2421054 |
End bp | 2421800 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642669773 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_001944185 |
Protein GI | 189347656 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000164058 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTGT TTTATGCCTT ACCCGGTCAG ATAGACCGGA AGGCAGGTCT GGTGATGCTG GATGGGGATG AGTATCATCA TCTTGTGCGT GTTCTTCGGA AAAAGCGGAA CGAATGCATT GCCGTTACCG ATGGGACGGG AACGCATTTC GATGTTTGCA TCACTGCGAT CGAAAAGAGC GTTCTCAGCG GAACGATTAC TGCAGAGCGG CCTGTCGCTC GTTCGGCAAC GACGGTGACC GTCGCTCTTT CGCTGCTTAA AGCGCCGCCG CGGTTTGAAC TTTTTCTCGA AAAAGCAACC GAGCTCGGTG TTTCGGCGGT GATTCCCATG ATTACCGCTC GTACCGTTGC CCAGCCGTCC GGAGACCGGA TCGCCAAAAG GCTTATCCGG TGGAAAACCA TCATACTTTC CGCCGCCCGG CAGTCCGGAC GCTACTATCT GCCGGATATC ATCGAGCCGC TGCCTTTCGG CAAGGTTATC GGGCTGAGCG GATATGACCG GAAACTGATT CCTTATGAGC GTTCACCCCA TACAGCATCG GATGTCCGCT GTACCGGAGG AAATTTGTTG TTTCTGATCG GGGGAGAGGG AGGATTTACC GCTGAAGAGG TTCTGCAGGC AAGAGATGCC GGCTTTACGG AGATCTCTTT CGGCAGATCT GTTCTGCGGG CTGAAACGGC AGGCATTTTT GCCGTCTCGA TGGTTCGCGC CCGGCTTCTC GAACAGACCG CAGAGGAGTG GCTATGA
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Protein sequence | MELFYALPGQ IDRKAGLVML DGDEYHHLVR VLRKKRNECI AVTDGTGTHF DVCITAIEKS VLSGTITAER PVARSATTVT VALSLLKAPP RFELFLEKAT ELGVSAVIPM ITARTVAQPS GDRIAKRLIR WKTIILSAAR QSGRYYLPDI IEPLPFGKVI GLSGYDRKLI PYERSPHTAS DVRCTGGNLL FLIGGEGGFT AEEVLQARDA GFTEISFGRS VLRAETAGIF AVSMVRARLL EQTAEEWL
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