| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_2043 |
|---|
| Symbol | |
|---|
| ID | 6355548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 2253203 |
|---|
| End bp | 2254252 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642669639 |
|---|
| Product | OmpA/MotB domain protein |
|---|
| Protein accession | YP_001944051 |
|---|
| Protein GI | 189347522 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0433092 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATC AGGATTCACG TTCGCGTTCC ATATTCTGCC GGATGGGCAG GATTCTTATG
TTTTTGCCGC TTTTTGTGCT TTTTTTGGCA GGAACGGATC TTTCAGCAGC CGATCTTCCG
GGTTCGAAAG ACAATCCGTT GCTGAAGCGG TTTGCCGGTT CGGAAATTGT CGGTTATCAC
GCAAAGAGCT TCGATGAATA CGAGCTTCAG ACCTCTACGT TCATTCGTTA CAATTTCGAA
ACCAGAAAAC GGGATTATGC AAAACCGCCG CTTAAACCGG AAGGCCGGCT GACGAGAATC
TGGTACGAGG CGGCCGGAGA TACCGGTTCG CTGGAAGTTT ACCGGAATTA TCTCAATGAA
CTGCGATCGA ATGGCTTCGT CATTCTCTAT GATTCCAAAA AAGATCCCGC GGCGACAAAA
TGGACGAACT ACCTTGCTCC TTTCGGATCT GTCGATCTTA CCACCAACAG AAGCAAGTAT
GTTTTTTTCG CTGCCGAGAA AAACGCTATC TGTGTTGCAA GCGCCAAAAA GAAGCGGCCT
GAAGGGGATG TTTATGTTTA TCTGACCGTT ATCGAATGGG GAAAGGATGA TTCGGTCTAT
AAGGCCAGAC GCGGAGCCTA TGCGGCGGTC GATATCATCG AAACCAGGCC AATGCAGCAG
AAAATGGTTA CGGTTTCTGC AGATGAAATG TCGCGCTCCA TCACTTCGAC CGGCAAGGTC
TCTCTTTACG GCATTTATTT CGATACCAAC AAGGCGGATA TAAAACCGGC CTCGAAACCA
GCTCTCGGGG AGATCGCAAA ACTTTTGAAG AAACAGCCGG CAATGAAGCT TCATGTTGTA
GGCCATACCG ACAATGCCGG TGGCTACGAA TTCAATGTAT CGCTTTCGAA ACGCAGGGCC
GATGCAGTGG TCGGTGTGCT GCAGAAAGAG TATGGTATCG CTCCCGGTCG CCTGACCGCC
AATGGTGTGG CCTATCTCGC TCCCGTTGCT TCCAATGCGG CTGAAGCCGG AAGGGCGAAA
AACCGTCGCG TCGAACTGGT GCCGAGATAA
|
|---|
| Protein sequence | MKHQDSRSRS IFCRMGRILM FLPLFVLFLA GTDLSAADLP GSKDNPLLKR FAGSEIVGYH
AKSFDEYELQ TSTFIRYNFE TRKRDYAKPP LKPEGRLTRI WYEAAGDTGS LEVYRNYLNE
LRSNGFVILY DSKKDPAATK WTNYLAPFGS VDLTTNRSKY VFFAAEKNAI CVASAKKKRP
EGDVYVYLTV IEWGKDDSVY KARRGAYAAV DIIETRPMQQ KMVTVSADEM SRSITSTGKV
SLYGIYFDTN KADIKPASKP ALGEIAKLLK KQPAMKLHVV GHTDNAGGYE FNVSLSKRRA
DAVVGVLQKE YGIAPGRLTA NGVAYLAPVA SNAAEAGRAK NRRVELVPR
|
|---|
| |