| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1906 |
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| Symbol | |
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| ID | 6354960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 2109686 |
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| End bp | 2112073 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642669503 |
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| Product | capsular exopolysaccharide family |
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| Protein accession | YP_001943917 |
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| Protein GI | 189347388 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGAAC AGAACAACTT CGAACAGGAA ATCAACATTC AGGAACTCCT GCGCCTGCTC
TGGGGAAGGA AGTATCTCAT TCTCGCCGTC ACGGCGGCAT CCCTTGCCCT GGCACTGCTT
TTCAGATATT CCGCAACGCC GGAATTCCGC TCGACGGCGG TGGTCATGAT CAAGGACTCC
AACGGCAGCG AGGGCGACGT GCTCGCTCCC ATGCTCGCCG TCATGCCGAG TTCGTTCATC
GATCCCATGA AAAACGATAT CGAGCTGATG AGCTCGCTGC CGATAGCTGA AAAGGCGGTC
GAACAGCTCT ACCGCAGCCC CATGCGCGAC TCGCTCGAGC TGTTCGGCAA ACGCCGCTAC
ATTTCTCCTA TCGACCGCCT GCTCGCGTTT GCGGGCCTGC AGGGGTTTTC GGAAAAGGAT
GCGGAAGAGG TGCCGGCGTC ACAAAAAGAG ACCATGCGGA ACTTCGCCGA GAATCTCAAG
GGGCGCATAA CCATCGACAA TCCCAAAGAG ACCAATGTGC TGCATGTAAC CGTTTCGAGT
CCGTTTCCCG AAGAGGCGGC CGTTCTCTCC AACGCGCTCT GCAGGGCTTA TCAGCAGAAG
GATATCGAAT GGAACTCCGA ACAGGCCAAA TCGGTGAACC AGTTTGTCGA GGAGCAGCTC
GGCGAACAGC AGAAGAAGGT GGCCACGGTC GAAAACAACC TTTCCGGCTA TATGGAAAAG
CAGGACATCT ACGAACTCAC CGGTAATGCT GACCAGCTGC TGAAAAAGCT TATCGATATC
GATGCCCGCT ATAACGAAAT CATGGCCGAA AGGAACATTC TCGCCAAGCG GCTCGACTTC
ATCCGTAAAA AGCTTTCCGG CGAAGAGAAG GCCCTGAGCG CCAACATCGC CGAGAGCGTT
GGCAGCCAGC TTCGCGCCGT ACAGAACCGC ATCAAGGCCG AAGAGGCCGA TTACATGGCG
CTCCTGCAGC AGAAAGGCGC TGCTTCACCT GAAGTGAAAG CCCGCCGGCA GCAGATCGAC
CAAATGAAGT CGCAGCTCGA TCAGGTGGTG CGCGGCAAGA TCGCCGGTGA GCTTGCCTAT
TCCGGCAGGG CACAGAAGTT CCAGTTCGAC CTCATCTCCG AGCAGCTCCA GACAGATCTT
CGCCTCGCCG AGCTGAACTA CAGCGCCCAG GAGTTCGGGA AGCTGAAAAA CTACTACGAA
AGCCAGCTGA ACGCCCTTCC CGACAAGCAG CTCAACTATG CGAGGCTGCA GCGCGACCGC
GAAGTGGTCA ACAGCACCTA CACCTTCCTC AAGCAGAAAT TCGAGGAGTC GCGCATCAAA
ATAGCTTCGG AGGTAGGACG TGTGGTCATT GTCGGGCCGG CATACCCTCC AAAGCTTCGC
GAGTCACCCG ATACCAAAAA GATTCTGCTT GTCGGGCTCG TGCTTGGTCT TGGACTTGGC
GGGGCACTGG TCTTCGTGCT TGAAATGCGC GACCATTCCG TCAAGGAGGA ACAGTTTTTC
GACGATCACG GTTTCGTGAC GCTCGCCCGC ATTCCGTTTG TCGATAAAGC GGAATTCACG
CTTGCCGACG GGATGAAAAA AGCGGTCGGC CAGTTGCTCG TAACCATCGA CCCGGGTAAA
GGCAACGGAA AATCGAACGG GAACGGCCGT CATCCCGGGC AGGGCAGTGC CGATGGTGCG
CCCCTGCTCA TTACCGACAA GCTCTCCTCC CCGTTTTCCG AAAGTTTCAG GGATCTGCGC
ACCAATCTCA CCTTCGCCAG GGCAGGGACT CCGTTACGGT CGGTGCTCGT AACCGGTACG
GCAGTCTCCG AAGGCAAATC GACCATCTGT GCCAATCTCG GCCTCGCCTT TGCGCTTACC
GGCAAGAGAG TGCTGATTGT CGATTGCGAT CTTCGCCGCC CCTCGCAGCA CAAACTGCTC
GGCAGCTCCA AGGCTCCCGG TCTTTCCAAC TATCTTGCCG GGCAGGAGGC CGATATGTCG
AAGCTCATCC AGCCTACCCT TAACGAGAAC CTCTTCCTGC TTCCTGCCGG AGCAGCTGTG
CCGAACCCGA ACGAACTGAT CGGATCGCAG AAGATGTCCG AAACCGTGGA ACTGCTCGAA
TTCCGGTACG ATATGGTCAT CATCGACAGT CCGCCGCTCC TGCTTATCAG CGATGCAGCC
CTGCTCTCGC AGTCCGTTGA CGGCATTCTG CTTGCGGCAA GGCTCGAGTA CACCAACAAA
AAGTTGCTGC AGGAGGTACA GAAAATCAGC TACATCAAGC CGCAACTGCT CGGCGTGGCG
CTTATTGGTT CTTCATCCCG CGATCGCTAC GGCTACGATC GCTACGGCTA CAAGGGGCAG
TACAAATACA AGACCTACAG CCACTATATA GATACGCCGG AATCGTAA
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| Protein sequence | MPEQNNFEQE INIQELLRLL WGRKYLILAV TAASLALALL FRYSATPEFR STAVVMIKDS
NGSEGDVLAP MLAVMPSSFI DPMKNDIELM SSLPIAEKAV EQLYRSPMRD SLELFGKRRY
ISPIDRLLAF AGLQGFSEKD AEEVPASQKE TMRNFAENLK GRITIDNPKE TNVLHVTVSS
PFPEEAAVLS NALCRAYQQK DIEWNSEQAK SVNQFVEEQL GEQQKKVATV ENNLSGYMEK
QDIYELTGNA DQLLKKLIDI DARYNEIMAE RNILAKRLDF IRKKLSGEEK ALSANIAESV
GSQLRAVQNR IKAEEADYMA LLQQKGAASP EVKARRQQID QMKSQLDQVV RGKIAGELAY
SGRAQKFQFD LISEQLQTDL RLAELNYSAQ EFGKLKNYYE SQLNALPDKQ LNYARLQRDR
EVVNSTYTFL KQKFEESRIK IASEVGRVVI VGPAYPPKLR ESPDTKKILL VGLVLGLGLG
GALVFVLEMR DHSVKEEQFF DDHGFVTLAR IPFVDKAEFT LADGMKKAVG QLLVTIDPGK
GNGKSNGNGR HPGQGSADGA PLLITDKLSS PFSESFRDLR TNLTFARAGT PLRSVLVTGT
AVSEGKSTIC ANLGLAFALT GKRVLIVDCD LRRPSQHKLL GSSKAPGLSN YLAGQEADMS
KLIQPTLNEN LFLLPAGAAV PNPNELIGSQ KMSETVELLE FRYDMVIIDS PPLLLISDAA
LLSQSVDGIL LAARLEYTNK KLLQEVQKIS YIKPQLLGVA LIGSSSRDRY GYDRYGYKGQ
YKYKTYSHYI DTPES
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