| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1837 |
|---|
| Symbol | |
|---|
| ID | 6355178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 2015619 |
|---|
| End bp | 2016941 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642669441 |
|---|
| Product | nucleoside-diphosphate-sugar pyrophosphorylase |
|---|
| Protein accession | YP_001943855 |
|---|
| Protein GI | 189347326 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.727944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCC TGATCGCCAT AAAGGAACAG CACCACAACT GGGTGCGCGA CGCTTTCCCC
AACATGCACC CGCTGCTCCT GCCGCTCTGC AACAAACCAT TCATCGAATA CCTTATCGAC
TTCGCCATCC TTGCCGACAG CCGCGAAATC CGCCTGCTCA GCGACGGATC ACTCATGGAA
ATCGAAGAAA TCTGCCAAAC CGGCAGCCGA TGGGGCGTTG AGCTCACCTA TGCGAACATC
CGCCCCGAAG ACGGAGAGCG CGAACTGCTC CACAAAAACA GAAAATTCTG CAACGACTGC
AGAACCATGA TCCTCAGCGG CTACACCTTT ATCGACTACG ACAAGCGTCT CGACTACCGG
GTACTCGCAA ATCACCTGGC CACCGGCCCC ATCGCATCCT GCCCGGCAGG AAGCATCGCG
TTTGCGGGCC CCCCCGAACC CGCTGCCGAC GACAACCCGC TGCCTGCCCT TCGAATAACG
CCGCTCGACA GCCTGCGAAG CTGTTATCAC ATCGCCATGC AAATCCTCGA AACCGGTGCC
GAACGCTATG TACTCCCCGG CTACGGCAGT GAACCCGGAT GCGCAATCGG CAGAAACGTA
GCCATCGCAA AAACTGCCGA AATCCGCAAA CCCGTAAGCA TCGGCAACAA CGTACAGCTG
CTCCCCGGCA CAATCATCGG CCCCATGGCC GTTATCGGCA GCAACGTCAT CATCGACAAA
GGCAGCTCCA TATCCGGCAG TATCATCTTC GACAACACCT ACATCGGCGA ACAACTTGAA
ATCGAAGGAC GCATCGCCTC CGGAAACACG CTCATCGACC CGGAAAGCGG CGCCTCTGTA
GCAATGGAAG ACCCCCATCT CCTCACCGGC ATTCATAGCG CAACAAACTC CGCCACGCTG
CTTCGCAAAA CAATCCACGC TCTCGCAGCA GCAATACTCA TCCTGCTGCA AGCCATCCCC
GTTATCATCC TCTACCCCCT GCTCAGGCTG CAGGGAAAAT GGAAAAACGG GCCAATAACG
CAACAGACCG GACTCGCGGA AACCCTTGCC GCAAAACTCT CCCTCGAGCG GTTCCCGCTG
CTTCCCAAAG TCCTTCTGGG GCAACTCGCC ATCATCGGCA GCGCTCCCCG GAGCAACAGC
CCGGGCTGCA GGCCTGCAGT CTTCAGCTAC GCCGAAGCAG AAGACTGGCC CGTAACCGGC
AGCGACGCCG CCATCGTTGA ACGCTACCAC GCCGTGCACA GCACTCCGTT CAACGACATC
GGCATGACCA TCAAAGCACT CATCAACAGA CCACACAAAA GGAACGCAGG AGCAGCAGCA
TGA
|
|---|
| Protein sequence | MKTLIAIKEQ HHNWVRDAFP NMHPLLLPLC NKPFIEYLID FAILADSREI RLLSDGSLME
IEEICQTGSR WGVELTYANI RPEDGERELL HKNRKFCNDC RTMILSGYTF IDYDKRLDYR
VLANHLATGP IASCPAGSIA FAGPPEPAAD DNPLPALRIT PLDSLRSCYH IAMQILETGA
ERYVLPGYGS EPGCAIGRNV AIAKTAEIRK PVSIGNNVQL LPGTIIGPMA VIGSNVIIDK
GSSISGSIIF DNTYIGEQLE IEGRIASGNT LIDPESGASV AMEDPHLLTG IHSATNSATL
LRKTIHALAA AILILLQAIP VIILYPLLRL QGKWKNGPIT QQTGLAETLA AKLSLERFPL
LPKVLLGQLA IIGSAPRSNS PGCRPAVFSY AEAEDWPVTG SDAAIVERYH AVHSTPFNDI
GMTIKALINR PHKRNAGAAA
|
|---|
| |