| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1673 |
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| Symbol | |
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| ID | 6353980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1838877 |
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| End bp | 1840394 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642669278 |
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| Product | protease Do |
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| Protein accession | YP_001943694 |
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| Protein GI | 189347165 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0684799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGA GAAAAAAAAA ATTGAAATAC CTGCTGCTGC TCCTTGTGGG AATAGCTGTG
GGCAGCGTTG TTTTTGCCAA TGTCGAGTTT AGTTTTCCCG GTCGGAATGC GGGTTTGAAT
CTCAGTAACA AACCAAATTA CGCCAATGCG AAAAATAACT TTGAGAATTA CCCGATACAG
ACACTTCGAG ATTTCAACGA AGCGTTCGTA AAAATTGCAG AATCGGCAAC ACCTTCGGTG
GTGACCATTT TTACCGAAAA GACCGTGAAT AGAAGGGTTA TCAGTCCGTT CGAGTTTTTC
GGACGCAGCC CTTTTGATGA TTTTTTTGGT TCGCCGAAGG GGGGGAGCCA GAATGGACGC
AAGGAGGTGC AGCGCGGTCT CGGTTCGGGT GTGATTGTGA CGTCGGACGG ATATATCCTT
ACCAACAATC ATGTCGTAGA TAAGGCAGAT GCCATCTATA TCCGCACATC CGACAACAGA
AAAATAGAGG CTAAAATCAT CGGTACGGAT CCTAAAACCG ATCTTGCCGT GATCAAGGTG
AACGTAAGAG GGCTTAAACC CATCATGATA GGGGACAGCG ACCGGCTTCG TGTTGGCGAG
TGGGTTATCG CTATCGGCAG TCCTCTCGGA GAGAGCCTCG CCAGAACCGT TACCCAGGGC
ATTGTCAGCG CTATCGGACG TTCCAATGTC GGCCTTGCCG ATTACGAGGA TTTTATCCAG
ACCGATGCAG CGATCAATCC GGGCAACTCG GGAGGCCCGC TGGTCAATAT CAACGGTGAA
TTGGTAGGCA TCAATACCGC AATTGCGAGC CGTACCGGGG GGTTTGAAGG TATTGGTTTT
GCGGTTCCTT CAAATATGGC ACAGAAAGTA CTGAATTCAC TCATTACGAC GGGAAAGGTT
ACCCGGGGCT ATCTTGGTGT GAGTATTCAG GACATTGACG AGAATATTGC AAAAGGTCTC
CAGCTTCAGA GCGCATCCGG GGTGCTTGTC GGTACCGTTG TGGCCGGCAG TCCAGCTGCA
AAATCAGGAA TCAGAACAGG TGATGTCATT CTTGATTTCA ACGACAGGAA ATCTACATCG
AGTGTTGATC TTCGCAATGA GATTGCCGTG ATGTCTCCGG GGTCCGTGGT TAAAATAAGG
ATTCTCAGAG ACGGAGAGGT AAAAGTTTTC AGTGTCCGTC TTGAAGAACA GCCGGATCAG
GCTTCTGTTT CTGCTGCACC TGCACAGCAG AACCCCGAAG TGCTTGGTTT CAGGTCACAG
GAGCTGACGC CTCAGCTCGC TCAGCAATTT CAGTTGCAGC AGGGTGCCGG AAAAGTGCTT
GTCACCGATG TCGACCAGTC AAGCAATGCA TTTCGTGCCG GTCTTCGTGC CGGTGACGTT
ATTGTAGCGG TCAACAAGCA GGCGATAAGT TCATATGCAC AGTACGCAGC GCTTCTGCAA
AAAGTGAAAG GCGGCGATCT TGTGTTTCTG CTTATCGACC GGCGAGGCAG TAAGGTCTAT
TTTGCCTTTA ATGTATAA
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| Protein sequence | MNKRKKKLKY LLLLLVGIAV GSVVFANVEF SFPGRNAGLN LSNKPNYANA KNNFENYPIQ
TLRDFNEAFV KIAESATPSV VTIFTEKTVN RRVISPFEFF GRSPFDDFFG SPKGGSQNGR
KEVQRGLGSG VIVTSDGYIL TNNHVVDKAD AIYIRTSDNR KIEAKIIGTD PKTDLAVIKV
NVRGLKPIMI GDSDRLRVGE WVIAIGSPLG ESLARTVTQG IVSAIGRSNV GLADYEDFIQ
TDAAINPGNS GGPLVNINGE LVGINTAIAS RTGGFEGIGF AVPSNMAQKV LNSLITTGKV
TRGYLGVSIQ DIDENIAKGL QLQSASGVLV GTVVAGSPAA KSGIRTGDVI LDFNDRKSTS
SVDLRNEIAV MSPGSVVKIR ILRDGEVKVF SVRLEEQPDQ ASVSAAPAQQ NPEVLGFRSQ
ELTPQLAQQF QLQQGAGKVL VTDVDQSSNA FRAGLRAGDV IVAVNKQAIS SYAQYAALLQ
KVKGGDLVFL LIDRRGSKVY FAFNV
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