Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1238 |
Symbol | |
ID | 6355339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1337569 |
End bp | 1338108 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642668854 |
Product | Lipocalin family protein |
Protein accession | YP_001943284 |
Protein GI | 189346755 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3040] Bacterial lipocalin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG GTATTGTTTT CCGCATCCCG TGTCCTTGCG GCAATAAATC AGACTCATAT TCAGTCATGT CACTTTTCGG AAAAAAACGC GACGTTTTTT CAGTACGAAC CGTTGAACGG GTCGATGCCG CAAGATATTG CGGCACATGG TATGAAATTG CAGCCGTTCC CCGTAAAAGA CAGCGGGAGT GCTCAAATAC CAAGGCCGAA TATACGCTGA CGGCAGACGG AAAGATCAGC GTAAGGAACT CCTGCTTCAG GCATGGAAAA ACCGTATCGA TAAAGGCTGT TGCGACTCCT GTTTCCGGAA GCGGAAACGC GTGGCTGAAA GTCCGGTTTT TTAGGCTTTT CAATGCAGAT TACAAGGTGA TCGAACTCTC TGATGACTAT TCATGGGCAG TCGTTTCGAG CGGTTCCGGT TCCGCGCTCT GGGTGCTCAG CCGTACGCCC TATATGAGCG GAGATGTTTA TGACCTTATC GTGGAAAAAC TCAGTCTCAG GCATATCGAT ACATCGGGCC TCGTAAAAAC CGTTCAATAA
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Protein sequence | MKKGIVFRIP CPCGNKSDSY SVMSLFGKKR DVFSVRTVER VDAARYCGTW YEIAAVPRKR QRECSNTKAE YTLTADGKIS VRNSCFRHGK TVSIKAVATP VSGSGNAWLK VRFFRLFNAD YKVIELSDDY SWAVVSSGSG SALWVLSRTP YMSGDVYDLI VEKLSLRHID TSGLVKTVQ
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