Gene Clim_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1238 
Symbol 
ID6355339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1337569 
End bp1338108 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content48% 
IMG OID642668854 
ProductLipocalin family protein 
Protein accessionYP_001943284 
Protein GI189346755 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG GTATTGTTTT CCGCATCCCG TGTCCTTGCG GCAATAAATC AGACTCATAT 
TCAGTCATGT CACTTTTCGG AAAAAAACGC GACGTTTTTT CAGTACGAAC CGTTGAACGG
GTCGATGCCG CAAGATATTG CGGCACATGG TATGAAATTG CAGCCGTTCC CCGTAAAAGA
CAGCGGGAGT GCTCAAATAC CAAGGCCGAA TATACGCTGA CGGCAGACGG AAAGATCAGC
GTAAGGAACT CCTGCTTCAG GCATGGAAAA ACCGTATCGA TAAAGGCTGT TGCGACTCCT
GTTTCCGGAA GCGGAAACGC GTGGCTGAAA GTCCGGTTTT TTAGGCTTTT CAATGCAGAT
TACAAGGTGA TCGAACTCTC TGATGACTAT TCATGGGCAG TCGTTTCGAG CGGTTCCGGT
TCCGCGCTCT GGGTGCTCAG CCGTACGCCC TATATGAGCG GAGATGTTTA TGACCTTATC
GTGGAAAAAC TCAGTCTCAG GCATATCGAT ACATCGGGCC TCGTAAAAAC CGTTCAATAA
 
Protein sequence
MKKGIVFRIP CPCGNKSDSY SVMSLFGKKR DVFSVRTVER VDAARYCGTW YEIAAVPRKR 
QRECSNTKAE YTLTADGKIS VRNSCFRHGK TVSIKAVATP VSGSGNAWLK VRFFRLFNAD
YKVIELSDDY SWAVVSSGSG SALWVLSRTP YMSGDVYDLI VEKLSLRHID TSGLVKTVQ