Gene Clim_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1004 
Symbol 
ID6355453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1095644 
End bp1096738 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content60% 
IMG OID642668628 
Producttransport system permease protein 
Protein accessionYP_001943059 
Protein GI189346530 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00447808 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTCC GTATTTCCGG CGCGCAGGCT TCGGACGGGC ATGCGTGGCC TCTTCTTTCT 
CCGAAAGCAG GCATGCTGTT CGTGCTCCTG CTTGCCCTTC TGCTGCTCTT TCTCCTCGAT 
ATCGTGCTGG GTTCGGTGCA GATACCGCTT GAAAGCGTTA TCGGGATTCT GCTCGGCAGG 
GGCGCCGAAC ACCCCGCCTG GGAGAAAATC ATTACGGCCA TCCGCCTGCC GAAAGCCGCA 
ACCGCGGTTA TTGCCGGAGC AGCCCTTTCG GTGAGCGGCC TGCAGATGCA GACGCTTTTC 
CGCAATCCAC TGGCAGGTCC CTCGGTACTC GGCATATCGG CCGGCGCAAG CCTCGGGGTC 
GCCGTGGTGA TGCTTGCTTC AGGCGGCGCG GCCAACGCGT TCGCCATCCG TCAGCTCGGC 
TTCGGGGGGA GCTGGCTTAT CGTCATCGCG GCAACGCTCG GCGCGATGGC CGTGCTGCTG 
ATCGTGCTCG GCATAGCCGT TCGGATCAGG GACAACGTCG TGCTGCTCAT CGTCGGCATC 
ATGGTCGGCA ATATCACGAT TTCACTGATC AGCATCTGGC AGTATTTCAG CGAACCCGAG 
CAGATCCAGG ACTATCTGAT CTGGACCTTC GGCAGCCTTG GCGGAGTACT CGGGCCGCAG 
CTTGCCGTGC TCGGCGCCGT TGTCGCTCTG GGACTTCTTG TCTCCTTTTC CGCTTCGAAG 
TCGCTGAACG TGCTTCTCCT CGGCGAAAAT TACGCGCGCA GCCTCGGCAT GAGCACGTTC 
TTCGTTCGGG TGTCGGTGAT TGCCGCCACC AGCCTGCTTG CCGGAAGCGT CACGGGGTTC 
TGCGGTCCCA TAGGGTTTAT CGGCATCGCC GTGCCGCATC TGACCCGTTC GATGCTCGAT 
ACCTCCGACC ATCGCTTTCT GATGCCCAGC TGCTGTCTGG TGGGAGGCAT CCTGATGCTT 
GCCTGCGATA TTGTCGCCCA GATGCCGGGA ACCCAGACAA CGCTGCCGAT CAATGCCGTG 
ACGGCATTGA TCGGTTCTCC GGTCGTCATC TGGGTCATTA TGAAACAAAG AAACCTCAAG 
TCCTCCTTTT CATGA
 
Protein sequence
MTVRISGAQA SDGHAWPLLS PKAGMLFVLL LALLLLFLLD IVLGSVQIPL ESVIGILLGR 
GAEHPAWEKI ITAIRLPKAA TAVIAGAALS VSGLQMQTLF RNPLAGPSVL GISAGASLGV 
AVVMLASGGA ANAFAIRQLG FGGSWLIVIA ATLGAMAVLL IVLGIAVRIR DNVVLLIVGI 
MVGNITISLI SIWQYFSEPE QIQDYLIWTF GSLGGVLGPQ LAVLGAVVAL GLLVSFSASK 
SLNVLLLGEN YARSLGMSTF FVRVSVIAAT SLLAGSVTGF CGPIGFIGIA VPHLTRSMLD 
TSDHRFLMPS CCLVGGILML ACDIVAQMPG TQTTLPINAV TALIGSPVVI WVIMKQRNLK 
SSFS