Gene Clim_0738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0738 
Symbol 
ID6356019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp808440 
End bp809516 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content56% 
IMG OID642668363 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_001942798 
Protein GI189346269 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCGGG AACAAAGCAT GTATAAAATC GTATCCATAC CGGGTGACGG CATCGGCCCG 
GAAGTTGTAG CCGGTGCTCT GGCAGTCATG AACCGGCTCG CCGAAAAACA CGGATTTACC 
ATCGCAATCG AAGAACATCC TTTCGGCGGT GCGTCCTACG ACCTGCACGG AGAGATGCTG 
ACCGAAGCAA CACTCGAAGC CTGCCGGAAC TGCGATGCGG TGCTGCTCGG AGCCGTTGGC 
GGCCCCAAAT GGGAAAGCCT TCCGCATGAA CACAAACCGG AAGCTGCGCT GCTGAAAATC 
CGCAGGGAAC TCGGCCTCTT CGCGAACCTC AGGCCGGCAA AAGTGTACGA TGCGCTTATC 
GACGCATCTT CGCTCAAGGC CGATGTGGTC GGAGGTACCG ACTTTGTCGT CTTCAGGGAA 
CTGACCGGCG GCATCTATTT CGGCCAGCCG AGAGGCTACG ACGAGAACAA AGGGTGGAAC 
ACAATGGTGT ATGAACGCTA TGAGGTCGAG CGAATCGCCC GCATCGCGTT CGAAGCCGCA 
CAGAAACGAG GCGGCAGGGT CACCTCGATC GACAAGGCAA ACGTCCTCGA GGTATCGCAG 
CTGTGGAGAA ACGTGGTGCA TGAAGTCCAC CGGGATTTCC CTGAAATCGA GCTGAGCGAC 
ATGTATGTAG ATAATGCCGC CATGCAGATC GTCCGGAACC CGAAACAGTT TGACGTCATT 
GTAACGGGCA ATCTTTTCGG GGATATCCTC AGCGACATTG CCGGCATGAT CACCGGAAGC 
CTCGGCATGC TCCCTTCGGC AAGCATCGGC AAATCGCATG CTCTCTACGA ACCGATCCAC 
GGCAGTGCAC CGGATATTGC CGGTCAGAAC AAGGCGAACC CGATAGCCAC TATCGCATCG 
GTCGCCATGA TGTTCGAGCA CAGTTTCTGC ATGCCGGATA TCGCCAATGA GATTTACCAG 
GCAATCGAAA CCACTCTCGC CGAAGGGCTG AGAACCGCCG ATATCGCCAA TGCGGGTCAG 
AGCGCCGTAT CGACGACTGA AATGACTGCG GCAATTGTAA AGAATCTCGG CCAATAA
 
Protein sequence
MHREQSMYKI VSIPGDGIGP EVVAGALAVM NRLAEKHGFT IAIEEHPFGG ASYDLHGEML 
TEATLEACRN CDAVLLGAVG GPKWESLPHE HKPEAALLKI RRELGLFANL RPAKVYDALI 
DASSLKADVV GGTDFVVFRE LTGGIYFGQP RGYDENKGWN TMVYERYEVE RIARIAFEAA 
QKRGGRVTSI DKANVLEVSQ LWRNVVHEVH RDFPEIELSD MYVDNAAMQI VRNPKQFDVI 
VTGNLFGDIL SDIAGMITGS LGMLPSASIG KSHALYEPIH GSAPDIAGQN KANPIATIAS 
VAMMFEHSFC MPDIANEIYQ AIETTLAEGL RTADIANAGQ SAVSTTEMTA AIVKNLGQ