Gene Clim_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0401 
Symbol 
ID6354396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp439517 
End bp440293 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content51% 
IMG OID642668032 
Productstationary phase survival protein SurE 
Protein accessionYP_001942473 
Protein GI189345944 
COG category[R] General function prediction only 
COG ID[COG0496] Predicted acid phosphatase 
TIGRFAM ID[TIGR00087] 5'/3'-nucleotidase SurE 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.341473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGAGC TGAAAAAACC GCATATACTT GTCTGTAACG ACGATGGCAT CGAAGGAGAG 
GGCATTCATG TTCTGGCTGC TTCCATGAAA AAGATAGGCA GGGTCACGGT TGTCGCTCCG
GCAGAGCCGC ACAGCGGAAT GAGCCATGCC ATGACTCTCG GTGTACCTCT TCGAATTAAA
GAATATCAGA GAAATAACCG TTTTTTCGGT TATACCGTCT CCGGTACTCC GGTGGACTGC
ATCAAGGTTG CCCTCAGCCA TATTCTTGAT GATAAACCCG ATATACTTGT TTCCGGCATC
AACTACGGAA GCAACACCGC AACCAACACC CTCTATTCCG GAACCGTAGC CGCAGCACTG
GAAGGAGCCA TACAGGGGAT AACCTCGCTT GCCTTTTCGT TGGCCACCTA TGAACATGCC
GATTTTACCT ATGCAGGAAA GTTTGCCCGC AAACTCGCAA AAAAAGTACT CCAGCAGGGC
ATTCCGGCCG ACACGATTCT GTCGGTCAAC ATCCCCAACG TTCCGGAATC GGAAATCGCA
GGAGTTCTCT CCACCAGCCA GGGCCGTTCC CGCTGGGAAG AGAACGCGAT CGAACGAAAC
GACATGTATG GCAACCCCTA CTACTGGCTC AACGGCACAC TCAAGCTGCT CGATGACTCT
CTGAGGCAGG ACGAATATGC CGTGCGTCGC AACTATGTTA CCGTAACGCC GCTCTCCTGT
GATCTGACAA ACCACACCTT TCTTGATTCA CTGAATCAAT GGAACCTGCA AAAATAA
 
Protein sequence
MNELKKPHIL VCNDDGIEGE GIHVLAASMK KIGRVTVVAP AEPHSGMSHA MTLGVPLRIK 
EYQRNNRFFG YTVSGTPVDC IKVALSHILD DKPDILVSGI NYGSNTATNT LYSGTVAAAL
EGAIQGITSL AFSLATYEHA DFTYAGKFAR KLAKKVLQQG IPADTILSVN IPNVPESEIA
GVLSTSQGRS RWEENAIERN DMYGNPYYWL NGTLKLLDDS LRQDEYAVRR NYVTVTPLSC
DLTNHTFLDS LNQWNLQK