Gene Clim_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0329 
Symbol 
ID6353848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp364070 
End bp364738 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content54% 
IMG OID642667959 
Productsurface antigen msp4 family protein 
Protein accessionYP_001942401 
Protein GI189345872 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000000000164582 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT CACTTTCCCT TTTGGCAGCA TTCCTCGTTG CCGGCATGTG GAGCGCACCT 
GTTCAGGCTG CCGATCACTA CGTAAGTGCT ATGGCCGGCA TGTCCTGGTT CCAGGACAGC 
GATATTGAGC ACGTGTATGC CGACACCGAT TACAAAGATG TTGCTACGGT CTCTTTTGAC 
AGCGGCCTGA CTGCAGTCGG CGCTATCGGT TGCGATTACG GCTCGACCCG TCTTGAAGCT 
GAAATCGGCT ATCAGAAGAA CGACGTCGAA ACGGATTCAG ACTATTTGAG TGGTGATGTA 
CAGGTTCTCT CCCTCATGGC AAACGGTTTC TATGACATCG ACCTCGGTGG CGTTGACCTC 
TATGCCATGG CCGGTGTTGG CGTCGCTCAG GTGAATGTTG ACATCGATGG CGAAAGATAT 
AGCCACAGAT ATCAGACATG GGTTGATACC AATTACGAAG CCAGCGAAGT CACTCTTGCC 
TACCAGGTTG GTGCAGGTCT TGCCATCCCT GTCGGCGACG GCGTGATGAT CGATGCCCGC 
TACCGTTACT TCGCTACCAC CGATTTCACC GCAGGTGATG ACGGTGCTGC ATCCTGGATG 
GGAAGTGCTG ATTACAACAC CAACGTCTCC AGCCACAGCG CACTGCTCGG CCTGAGAGTC 
AACCTCTGA
 
Protein sequence
MKKSLSLLAA FLVAGMWSAP VQAADHYVSA MAGMSWFQDS DIEHVYADTD YKDVATVSFD 
SGLTAVGAIG CDYGSTRLEA EIGYQKNDVE TDSDYLSGDV QVLSLMANGF YDIDLGGVDL 
YAMAGVGVAQ VNVDIDGERY SHRYQTWVDT NYEASEVTLA YQVGAGLAIP VGDGVMIDAR 
YRYFATTDFT AGDDGAASWM GSADYNTNVS SHSALLGLRV NL