| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0314 |
|---|
| Symbol | |
|---|
| ID | 6353831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 346905 |
|---|
| End bp | 348083 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642667943 |
|---|
| Product | DNA protecting protein DprA |
|---|
| Protein accession | YP_001942387 |
|---|
| Protein GI | 189345858 |
|---|
| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
|---|
| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAGC CACATGCAGG AAAAGATGCC GGGCTTTTCC TGTTGACGCT CGCCAGCGTC
CCCGGACTCG GGCCTGCAAG AATAAATGCC ATCATAACCC GCTTCGGCTA TCAGCCCGAT
CTGCTCAGGG CATCTGCGGA TGTATTTCTT GAGGTTCCCG GCATAGGCCG GTCACTTGCG
GAAGAGATCT CCGGTTTTCT CAGCGGCAGT AAACGACGCG AAGCGGAAGA AGCTTCCCTT
CGACAGTATG AGGAGCTTGA TCGCCATCAG GCCTCGCTGG TCACGATCTT CGACCCATGT
TTTCCTGCCC TGCTCAAAGA AATTTATGAC CCGCCCCCTT TTCTGTTCGT TCGCGGCTCT
TTTTCCGAAC CGGAACCGCC ATCGATAGCC ATAGTAGGAA CCAGGCGAGC ATCAGCTTAT
GGAAAACAGG CAGCGGGCCT GCTCTCAGGC GAACTTGCTT CCCGGGGCCT GCTGATCGTC
AGCGGTCTGG CATATGGAAT CGATACCGCG GCGCATGAGG CCGCCATGAG GGCAGGAGGA
AAAACCATCG CGGTGCTTGC AGGCAGTGTC GACCATGTCT ATACCGATCC CAGGGGGAAA
ATCTGGCCGA AAATCATCGA ACAGGGTGCT CTCATTTCAG AAGAACTGTT CGGTTCCGAA
CTGCTCCCCG GAAAATTCCC CAAACGGAAC AGGATCATCT CGGGAATGTC GCTCGGCACT
GTTGTCGTTG AATCCGACCT GAAAGGTGGA GCGCTCATCA CGGCATCGTA CGCACTTGAA
CAGAACCGGG AGGTCTTCGC CGTACCGGGA ACCATATACT CGCACAATTC AAGGGGAACA
AACCGCCTGA TCCAGTCCGG GCAGGCAAAA ATGGTTCTTG CGACAGACGA TGTGCTTGAA
GAACTTAACC GTCCTTCCCT GAATATCCCG GTGCATGAGC ATGCTGCAAC CGATACCGTA
ACCATCGTCC TGTCGAAAGC AGAACGTGAG CTGCTGGCGT ACATGGATAC CGGACCGATA
CATATCGACG CCCTTGCCCT GCAGGCCGGG CATGATATTT CTGAATTGCT CGTTCTGTTA
TTCGAGCTTG AACTGAAGAA AGCCGTCGTC CAGCTCCCCG GCCAATTCTT TGGTAAAAAA
CAGATAAAAC ATGAAAAGAA TAGTCATTAT AGGCTCTAA
|
|---|
| Protein sequence | MNEPHAGKDA GLFLLTLASV PGLGPARINA IITRFGYQPD LLRASADVFL EVPGIGRSLA
EEISGFLSGS KRREAEEASL RQYEELDRHQ ASLVTIFDPC FPALLKEIYD PPPFLFVRGS
FSEPEPPSIA IVGTRRASAY GKQAAGLLSG ELASRGLLIV SGLAYGIDTA AHEAAMRAGG
KTIAVLAGSV DHVYTDPRGK IWPKIIEQGA LISEELFGSE LLPGKFPKRN RIISGMSLGT
VVVESDLKGG ALITASYALE QNREVFAVPG TIYSHNSRGT NRLIQSGQAK MVLATDDVLE
ELNRPSLNIP VHEHAATDTV TIVLSKAERE LLAYMDTGPI HIDALALQAG HDISELLVLL
FELELKKAVV QLPGQFFGKK QIKHEKNSHY RL
|
|---|
| |