Gene Cla_1547 details

Gene Information

• Locus tag: Cla_1547
• ID: 7411293
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 1499476
• End bp: 1501449
• Gene Length: 1974 bp
• Protein Length: 657 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 643718668
• Product: MCP-domain signal transduction protein
• Protein accession: YP_002576098
• Protein GI: 222824524
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGCA TTAAACTAAA AGTTGCTATG ATTGCAAATA TCATGGCGGT TATATGTCTT 
TTAATTTTAG GCATTGTTAC ATTTATTTTT GTAAAACAAT CTCTTTTTGA TGAAATTGTT 
AATTCAGAAA AAAATCGTTT AATTTCTACT AATAATCTTG TCGAAAACTT CAGAGAAAGC 
ACTTCTAATT CTTTATTAAA ATTATCCGAG ACTATCCTCA GAAATCCTTA TTCAAATCTT 
AATTCTCAAG AAGCACTAGC GCAAAATGTT GGTGTGCAAC TAAAAGCCTT TAGAGATGCA 
GGAAATTATT TAGCAGTATA TATTGCTCAA CCAGATGGTG AATTAGTTGT AAGTGATCCA 
GATAGTGATA GTAAAAATAT TGACTATGGT TTTTATGGAA AAGCTGATGG TTATGATGCA 
AGAACAAGAG AATTTTATAT AGAAGCAAGG AAAAAAAATG GCTTATTTAT AACTGCCTCA 
TATATTGATG CAACCACTGG CTTACCTTGC TTTACTTACG CTATGCCTTT AAATAAAGAT 
GGTAAATTTG TAGGTATTTT AGCGATTGAT GTTTTAGTTA AAGATTTAAT AGAAAATTTA 
AAACAAATGC CAGGTGATTC TTTCGTTTAT GATAAAAATC GTTACGCATT TGCATCTACT 
CATAAAAATT ACACAGGAAA TCATCCAAAT ATTTCTACAA TCGCTGATGC ATTTTCAAAA 
ACTAAAAACA ACGAACCTTT CTTCTATACT AGCGCTGAAG GAAATGAAAG ACTTGCCTTG 
TGTAATAATT CAAATGACTA CACTGTATGT AATGTTGCTT ATGTTGATAC AATAAACAAT 
TCAAGTGAAA AAATTGCATA CATTCAAGCT ATTATAGTTA TTTTCACAAG TATTTTAAGT 
GTTGTGTTGT TGTATTTTAT CGTTTCACGC TATCTTTCTC CACTAGAAAA AATCCAAACA 
GGCCTTAACT CATTCTTTGA TTTTATCAAC CATAAAACCA AAGACTCAGC TATGATTAAT 
GTTAATACAA ATGATGAACT AGGTGCTATG GCTAAAGCTA TCAATGAAAA CATCACTAAA 
ACTAAAAATG CTTTAGAACA AGATGCTAAA GCAGTAGAAC AATCAGTTGA TACAGCTAAA 
GAAATAGAAA GTGGTAATTT AACAGCAAGA ATTACTGCAA TTCCTGCTAA TCCTCAATTA 
ATAGAATTAA AAAATGTATT AAATGAAATG CTTAGTGTAT TAGAAGAAAA AGTTGGTTCT 
AATATGAATG AAATCAATAG GGTTCTTGAT AGCTATAAAG CATTAGACTT TACAACAGAA 
GTTACTAATG CTAAAGGTGG GGTTGAAATA ACTACTAATG TATTAGGTCA AGAAATAGTA 
GCTATGCTAA GACAATCTTC TGAATTTGCT AATTTACTTG CAACACAAAG TGGTAAATTA 
CAAAGTGCTG TTAGAGAATT AACAGATTCT TCATCAAGCC AAGCTTCTTC TTTGGAAGAA 
ACAGCTGCTG CTTTAGAAGA AATAACATCT TCTATGCAAA ATGTATCTCA TAAAACAAGT 
GAAGTAATAG CTCAAAGTGA AGAGATTAAA AATGTTACTT CTATAATAGG AGATATAGCT 
GATCAAATTA ATCTACTTGC ATTAAATGCT GCTATAGAAG CTGCAAGAGC TGGAGAGCAT 
GGTAGAGGAT TTGCTGTTGT TGCTGATGAA GTTAGAAATT TAGCTGAGAG AACTCAAAAG 
TCTTTAGGTG AGATAGAAGC TAATACTAAT ATCTTAGTTC AATCTATCAA TGAAATGGGT 
GAGAGTATTA AAGAACAAAC TACAGGTATT ACTCAAATCA ATGATGCTGT AGCTCAAATT 
GATCATGTAA CACAAGAAAA TCTTAAAATA GCTAATGATA GTGCTATAGT GGCTGATAAT 
GTAAATAAAA TAGCTAGCGA TATCTTAGAG GATGCTAAGA AGAAGAAGTT TTAA 

 

Protein sequence

MKSIKLKVAM IANIMAVICL LILGIVTFIF VKQSLFDEIV NSEKNRLIST NNLVENFRES 
TSNSLLKLSE TILRNPYSNL NSQEALAQNV GVQLKAFRDA GNYLAVYIAQ PDGELVVSDP 
DSDSKNIDYG FYGKADGYDA RTREFYIEAR KKNGLFITAS YIDATTGLPC FTYAMPLNKD 
GKFVGILAID VLVKDLIENL KQMPGDSFVY DKNRYAFAST HKNYTGNHPN ISTIADAFSK 
TKNNEPFFYT SAEGNERLAL CNNSNDYTVC NVAYVDTINN SSEKIAYIQA IIVIFTSILS 
VVLLYFIVSR YLSPLEKIQT GLNSFFDFIN HKTKDSAMIN VNTNDELGAM AKAINENITK 
TKNALEQDAK AVEQSVDTAK EIESGNLTAR ITAIPANPQL IELKNVLNEM LSVLEEKVGS 
NMNEINRVLD SYKALDFTTE VTNAKGGVEI TTNVLGQEIV AMLRQSSEFA NLLATQSGKL 
QSAVRELTDS SSSQASSLEE TAAALEEITS SMQNVSHKTS EVIAQSEEIK NVTSIIGDIA 
DQINLLALNA AIEAARAGEH GRGFAVVADE VRNLAERTQK SLGEIEANTN ILVQSINEMG 
ESIKEQTTGI TQINDAVAQI DHVTQENLKI ANDSAIVADN VNKIASDILE DAKKKKF