| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1487 |
|---|
| Symbol | iscU |
|---|
| ID | 7411233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | + |
|---|
| Start bp | 1430798 |
|---|
| End bp | 1431769 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643718609 |
|---|
| Product | NifU-like protein |
|---|
| Protein accession | YP_002576044 |
|---|
| Protein GI | 222824470 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
|---|
| TIGRFAM ID | [TIGR02000] Fe-S cluster assembly protein NifU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA ATAATTTAAT TGGTGGATCA ATTTGGGATG AGTATTCCCA AAAAGTACAA
GATAGAATGA ATAATCCTCA ACATATGGGT GAATTTACAC AAGAAGATGC ACAAAAAGCA
AACGCAAAGC TTATTGTTGC AGATTTTGGA GCTGAAAGCT GTGGTGATGC GGTTAGGCTT
TATTGGTTAG TAGATGAAAA AACTGATAAA ATTATAGATG CTAAATTTAA AAGCTTTGGC
TGTGGTACAG CAATAGCAAG TAGTGACACT ATGGTTGATC TTTGTATAGG TAAAACTGTA
GATGAAGCTG TAAAAATTAC CAATTTAGAT GTTGAATTTG CAATGAGAGA TAACCCCGAA
ACTCCTGCAG TTCCACCTCA AAAAATGCAC TGTTCAGTTA TGGCTTATGA TGTTATCAAA
CAAGCCGCAG CACATTATAA AGGTGTTGAT CCTGAGGATT TTGAAGATCA AATTATAGTT
TGTGAGTGCG CTAGAGTAAG CCTTGGAACC ATCAAAGAAG TAATCAAACT AAATGATTTA
CATACAGTAG AAGAAATAAC GCAATTTACC AAAGCAGGTG CTTTTTGTAA ATCTTGTGTT
AAGCCTGGAG GGCATGAGAA AAAAGATTAT TATCTTGTAG ATATTTTAGC TGAAACTAGG
GCTGAAATGG AAAGAGAAAA ACTAAAAGAT CAAAGTAAAA CAGATATTGC TTTTGATGAT
ATGACTATGG TTAAGCAGCT AAAAGCAGTA GAAGCTGTTT TAGATAGCGA TGTGCGTCCT
ATGCTACATG GTGATGGTGG AGATTTAGAA GTAATTGATA TACAAAAAAG TGAAAATAAA
AATATAGATA TATACATACG CTATCTTGGA GCATGCAGTG GTTGTTCAAG TGGGAGTGGT
GCAACCTTAT ATGCCATAGA AAATATCTTA CAAGAAGAAC TTAGTCCAAA TATACGCGTT
ATACCTGTTT AA
|
|---|
| Protein sequence | MAKNNLIGGS IWDEYSQKVQ DRMNNPQHMG EFTQEDAQKA NAKLIVADFG AESCGDAVRL
YWLVDEKTDK IIDAKFKSFG CGTAIASSDT MVDLCIGKTV DEAVKITNLD VEFAMRDNPE
TPAVPPQKMH CSVMAYDVIK QAAAHYKGVD PEDFEDQIIV CECARVSLGT IKEVIKLNDL
HTVEEITQFT KAGAFCKSCV KPGGHEKKDY YLVDILAETR AEMEREKLKD QSKTDIAFDD
MTMVKQLKAV EAVLDSDVRP MLHGDGGDLE VIDIQKSENK NIDIYIRYLG ACSGCSSGSG
ATLYAIENIL QEELSPNIRV IPV
|
|---|
| |