Gene Cla_1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_1404 
SymbolilvE 
ID7409911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp1351016 
End bp1351930 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content34% 
IMG OID643718526 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_002575971 
Protein GI222824397 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGGG CAAAAAAAAT TTGGATGGAT GGAAAAATCA TTGATTTTGA TGATGCAAAA 
ATCCATGTTT TAACACATTC ATTACATTAT GCAAATGCGG TTTTTGAAGG AACGAGAGCT
TATAAAACAC AAAATGGTTT AGCAATTTTT AGATTAAAAG AACATACCAA AAGACTTTTA
GAGTCTGCAA AAATCACTTT AATCAACTCG CCTTTTTCTC AAGAAGAACT TGAAAACGCA
CAAGTTGAGC TTTTAAGGGC AAATGATTTT CAAAATAACA CTTATTTGCG CCCATTGATC
TTTTTAGGTG ATGGAACTAT GGGAGTTTAT CATGCTAAAG CTCCTGTTAG AGTAGCTATT
GCTGCTTGGG AATGGGGTGC TTATTTGGGC GAAGAAGGCT TGGAAAAAGG TATTAAGGTT
AAAATTTCTT CTTTTGCTAG AAACAGCGTA AAATCTAGCC TAGGTAAAGC CAAAGCAAGT
GCAAATTACT TGAATTCTCA AATGGCTAAA TATGAAGCTA TAGAAGCAGG ATATGAAGAA
GCTTTAATGC TAGATGAGGA AGGTTTTGTA GCAGAAGGAA CAGGTGAGTG CTTTTTTATG
GTTAAAGATG GGAAATTAAT CACTCCACCA AATGATTTTT CATTAAAAAG TATCACTCAA
GATACTGTTT TAAAAATTGC ACATGATTTG GGTATAAGCG TAGTGCGCCA AAGAATTTCA
AGAGATGAAG TTTATGTGGC CGATGAAGCA TTTTTCACAG GAACTGCAGC AGAAATAACC
CCAATAAATA ATATTGATGC AAGAATTATA GGAAATGGAA AAAGAGGTGA GCTAACGACA
AAGCTTCAAA ATGCGTATTT TGATATAGTT TATGGACGCA ATGAAAAATA CGCTTCTATG
CTAACTTATA TTTAA
 
Protein sequence
MIRAKKIWMD GKIIDFDDAK IHVLTHSLHY ANAVFEGTRA YKTQNGLAIF RLKEHTKRLL 
ESAKITLINS PFSQEELENA QVELLRANDF QNNTYLRPLI FLGDGTMGVY HAKAPVRVAI
AAWEWGAYLG EEGLEKGIKV KISSFARNSV KSSLGKAKAS ANYLNSQMAK YEAIEAGYEE
ALMLDEEGFV AEGTGECFFM VKDGKLITPP NDFSLKSITQ DTVLKIAHDL GISVVRQRIS
RDEVYVADEA FFTGTAAEIT PINNIDARII GNGKRGELTT KLQNAYFDIV YGRNEKYASM
LTYI