Gene Cla_1261 details

Gene Information

• Locus tag: Cla_1261
• Symbol: ftsH2
• ID: 7410994
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 1216322
• End bp: 1218244
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 643718386
• Product: cell division protein FtsH
• Protein accession: YP_002575832
• Protein GI: 222824258
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 0.112484
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAA AACCAAACGA ACCAAAAGAT AATCCAAACA ATAATAATTT TTTTAACAAA 
AACCCTATTT TTATTTTTGC TATTTTTGCC ATTGTGATGA TTCTTTTATT TAAGGGATTT 
TCAGACGATG GTAGTATGGG TATTATGGGT GGAGAAAACA CCAAAAAAGT TACTTATTCT 
GAATTAAAAA CTTTAATTGA AAACAATCAA ATTGCCCAAG TTAACATAGG TCAAACCACC 
ATAAAAGCAG TGTCTAAAGC AGGAAATATG GTATATATTA CTAAAAAAGT TCCAAATGAT 
GCTACTTTTG TGCCTTTGCT TGATTCAAAA GGCGTTTCTT ATGGAGCATT TAATGAGAGT 
AATTGGTTTA TAGATATCTT ACTTTCTTGG GTTTTACCAG TATTTATTTT CTTTGGAATT 
TGGATGTTTT TAGCTTCTCG TATGCAAAAA AATATGGGTG GATCTATACT TGGTATAGGA 
AGTTCTAAAA AACTTGTAAA TTCAGAAAAA CCAAAAGTTA AATTCAATGA TGTTGCAGGT 
GTTGAAGAGG CTAAAGAAGA AGTTAAAGAG ATTGTTGATT TTCTAAAATA TCCTGAAAGA 
TATATAAGCT TGGGTGCTAA AATTCCAAAA GGACTTTTAC TTGTAGGCCC TCCAGGTACG 
GGTAAAACTT TGCTTGCAAA AGCAGTAGCA GGTGAAGCTG ATGTGCCTTT TTTTAGTGTT 
TCAGGATCAT CTTTTATAGA AATGTTTGTG GGTGTTGGAG CTAGCAGGGT TAGAGATTTA 
TTTGAAAATG CCAAAAAAGA AGCTCCAGCT ATAGTTTTTA TAGATGAAAT TGATGCCATT 
GGTAAATCTC GTGCTGCAAG TGGTATGATG GGTGGAAACG ATGAAAGAGA ACAAACTTTA 
AATCAACTTT TAGCAGAAAT GGATGGCTTT GGGACTGAAA GCTCTCCTGT TATAGTTTTA 
GCAGCTACAA ATCGTCCTGA AGTTTTAGAT GCAGCCTTGC TTAGACCAGG TCGTTTTGAT 
AGACAAGTTT TAGTTGATAA GCCTGATTTT AAAGGAAGAT GTGATATTTT AAAAGTTCAT 
ATGAAAGATG TTAAAATTTC ACCTGAAGTA AAAGTTGAAG ATATAGCAAG ATTGACAGCA 
GGACTTGCGG GTGCTGATTT GGCAAATATT ATAAATGAAG CAGCTTTACT TGCAGGTAGG 
GATTCTAAAA AACATGTAGA ACAAAAAGAC TTAGTTGAAG CAGTAGAAAG AGCTATAGCA 
GGACTTGAGA AAAAATCACG CAGGATAAAT GATAAAGAGA AAAAAATCGT AACTTATCAT 
GAGTGCGGCC ATGCTTTAAT CGCTGAAACT ACAAAAGGTG CTAAAAAAGT AAGTAAAGTT 
TCTGTTATTC CTCGTGGTTT AGCAGCTTTA GGATATACAC TCAATACCCC TGAAGAAAAT 
AAATTTTTAA TGCAAAAACA CGAGCTTTTA GCTGAAGTTG ATGTACTTTT GGGCGGGCGT 
GCGGCCGAAG AAATTTTCAT AAAAGAAATT TCAACTGGTG CAAGTAATGA CCTTGAGCGT 
GCAACTGATA TCATAAAAGC AATGATTTCT ATGTATGGTA TGAGTGATAT AGCTGGACTT 
ATGGTGCTTG AAAAACAAAG AAATACTTTC TTAAGTGGTG GACAAACTAT CAAAGATTAT 
TCTGATAAAA TGGCTCAAGA TTTAGATGAA TATGTGAAAA AAACTTTAGA TGAGCGTTAT 
GCAGGTGTAA AAGAAATTTT AAAAACTTAT AGTGGCGCTA TAGAAACTAT GGTAAAAGCT 
TTATACGAAG AAGAAACTAT CGATGGTGCT AAAGTAAGAG AGATTATTAA AAACTATGAA 
GAAGAAAACA ATCTTCCAAC ACGCTTAGAA GAAAAAGAGC AAGAAGTTAT TAAGGATAAC 
TAA 

 

Protein sequence

MNKKPNEPKD NPNNNNFFNK NPIFIFAIFA IVMILLFKGF SDDGSMGIMG GENTKKVTYS 
ELKTLIENNQ IAQVNIGQTT IKAVSKAGNM VYITKKVPND ATFVPLLDSK GVSYGAFNES 
NWFIDILLSW VLPVFIFFGI WMFLASRMQK NMGGSILGIG SSKKLVNSEK PKVKFNDVAG 
VEEAKEEVKE IVDFLKYPER YISLGAKIPK GLLLVGPPGT GKTLLAKAVA GEADVPFFSV 
SGSSFIEMFV GVGASRVRDL FENAKKEAPA IVFIDEIDAI GKSRAASGMM GGNDEREQTL 
NQLLAEMDGF GTESSPVIVL AATNRPEVLD AALLRPGRFD RQVLVDKPDF KGRCDILKVH 
MKDVKISPEV KVEDIARLTA GLAGADLANI INEAALLAGR DSKKHVEQKD LVEAVERAIA 
GLEKKSRRIN DKEKKIVTYH ECGHALIAET TKGAKKVSKV SVIPRGLAAL GYTLNTPEEN 
KFLMQKHELL AEVDVLLGGR AAEEIFIKEI STGASNDLER ATDIIKAMIS MYGMSDIAGL 
MVLEKQRNTF LSGGQTIKDY SDKMAQDLDE YVKKTLDERY AGVKEILKTY SGAIETMVKA 
LYEEETIDGA KVREIIKNYE EENNLPTRLE EKEQEVIKDN