Gene Cla_1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_1232 
Symbol 
ID7410396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp1186041 
End bp1186712 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content25% 
IMG OID643718358 
ProductLmbE-like protein 
Protein accessionYP_002575804 
Protein GI222824230 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00000113124 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGGAA AAAATGTTGT AGTTATTGCT GTTCATCCAG ATGATGAAAC TTTAGGAGCA 
GGTGGAACAT TATTAAAACA CAAATTAAAT GGCGATAAAA TTCATTGTAT TTTTTGCACT
GATATTTATG AAGATGATGG ATTTACTAAA TCACAAATAA AAAAAAGAGA AAAAGAAATT
CAAAAAATTT GCAGTGAATA TGGGTTTGAT AGTTTTTATC GTTTGGGCTT AAGAACAACG
AAAATAGATG AATATTCTCA GAGTTTTATA ATCGATAAAA TATCTAAGAT TTTTTTAAAA
ATTCAACCAA ATATTGTTTA TTTGCCATTT GCTTATGATG TTCATAGTGA TCATCGTATA
ATTTTTGATG CATCATATTC TTGTACTAAA TCTTTTCGTT ATCCTAGCAT AGAAAAAATA
TTAATGATGG AAACTATTAG CGAAACAGAG TTTTCACCAG CAATTTCAAA TCAAATTTTT
ATACCAAATG TTTTTGTAGA TATTACAAAT TTTATAGATA AAAAATGTGA AATTATGAAA
ATTTATAAAA GTGAAATAAA ATCTATTCCT TTCCCAAGAA GTATAGAAAA TATTAAAGCA
TTAGCTTTAT ATAGAGGAAG TACTTATGGT GGAAAAAAAA TAAAATCTAT GCTGAAAGTT
TTATGCTTTT AA
 
Protein sequence
MYGKNVVVIA VHPDDETLGA GGTLLKHKLN GDKIHCIFCT DIYEDDGFTK SQIKKREKEI 
QKICSEYGFD SFYRLGLRTT KIDEYSQSFI IDKISKIFLK IQPNIVYLPF AYDVHSDHRI
IFDASYSCTK SFRYPSIEKI LMMETISETE FSPAISNQIF IPNVFVDITN FIDKKCEIMK
IYKSEIKSIP FPRSIENIKA LALYRGSTYG GKKIKSMLKV LCF