Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_1232 |
Symbol | |
ID | 7410396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 1186041 |
End bp | 1186712 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 643718358 |
Product | LmbE-like protein |
Protein accession | YP_002575804 |
Protein GI | 222824230 |
COG category | [S] Function unknown |
COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00000113124 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGGAA AAAATGTTGT AGTTATTGCT GTTCATCCAG ATGATGAAAC TTTAGGAGCA GGTGGAACAT TATTAAAACA CAAATTAAAT GGCGATAAAA TTCATTGTAT TTTTTGCACT GATATTTATG AAGATGATGG ATTTACTAAA TCACAAATAA AAAAAAGAGA AAAAGAAATT CAAAAAATTT GCAGTGAATA TGGGTTTGAT AGTTTTTATC GTTTGGGCTT AAGAACAACG AAAATAGATG AATATTCTCA GAGTTTTATA ATCGATAAAA TATCTAAGAT TTTTTTAAAA ATTCAACCAA ATATTGTTTA TTTGCCATTT GCTTATGATG TTCATAGTGA TCATCGTATA ATTTTTGATG CATCATATTC TTGTACTAAA TCTTTTCGTT ATCCTAGCAT AGAAAAAATA TTAATGATGG AAACTATTAG CGAAACAGAG TTTTCACCAG CAATTTCAAA TCAAATTTTT ATACCAAATG TTTTTGTAGA TATTACAAAT TTTATAGATA AAAAATGTGA AATTATGAAA ATTTATAAAA GTGAAATAAA ATCTATTCCT TTCCCAAGAA GTATAGAAAA TATTAAAGCA TTAGCTTTAT ATAGAGGAAG TACTTATGGT GGAAAAAAAA TAAAATCTAT GCTGAAAGTT TTATGCTTTT AA
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Protein sequence | MYGKNVVVIA VHPDDETLGA GGTLLKHKLN GDKIHCIFCT DIYEDDGFTK SQIKKREKEI QKICSEYGFD SFYRLGLRTT KIDEYSQSFI IDKISKIFLK IQPNIVYLPF AYDVHSDHRI IFDASYSCTK SFRYPSIEKI LMMETISETE FSPAISNQIF IPNVFVDITN FIDKKCEIMK IYKSEIKSIP FPRSIENIKA LALYRGSTYG GKKIKSMLKV LCF
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