| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1214 |
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| Symbol | |
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| ID | 7410378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 1168695 |
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| End bp | 1170248 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 643718340 |
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| Product | phosphodiesterase |
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| Protein accession | YP_002575786 |
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| Protein GI | 222824212 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGAAA TATTAGTCGC ATTAATAGCC GTTTTTATAG GCGGAGGGAT TGGGTATGTA
GTCGCCAAAA AGATTAATGA TGCAAATTTC AATATCTTTT TAGAGCAAGC AAAAGCAAAA
GCAAAAGCCA TTGAATATGA AGCTGAACTA ACACTTAAAG ATGCTAAAAA TTCAGTTGCT
GAAGCTGAAT TTACAGCAAA GAAAAAATTT GATGACAAAA TTCAAAAACT GCAAAAAGAG
CATTCTATTA AGCTAGAAGA GCTTAATAAA AAAGAACAAA ACCTTCATTA TCAAGAAAAA
CTTCATGAGG AAAACAAAAA CAAATTAGCA AAAGAGCAAC AAACTATAAA AGCCTTACAT
GAGGAAAATG AAAATTTAAA ACAAAATTAT GAAACAAAGC TTAGTGAGGT GTTAAAAATT
CTTGAACATT CAGCTGGTCT TACACAAGAA GAAGCAAAAA ATATAGTTTT ACAAAAAGTA
GAAGAAAACT CAAGAGCTGA GATTGCTCAT ATTGTTAGAA AATACGAAGA AGAAGCTAGA
AATGAAGCCA AAAGAAAGGC TAATTTTATC TTAGCGCAAG CTACTTCAAG ATTTGCAGGG
GAATTTGCTG CTGAGAGATT AATCAATGTA GTAAATATCA AAAATGATGA ACTAAAAGGT
CGTATTATAG GCAAAGAGGG AAGAAATGTT AAAACCTTAG AAATGGTTTT GGGTGTTGAT
ATTATCATCG ATGATACACC TGGAGCAATT ATAGTGAGTT GTTTTAATCT TTATAGGCGT
GCCATTGCTA CAAAGGTAAT AGAACTTTTG GTTGAAGATG GAAGAATCCA ACCTGCAAAA
ATAGAAGAAA TTCATGAAAA AGTTTGTAAA GAATTTGAAG ATAATATCTT AGAAGAAGGT
CAAACTATAG TAATGGATTT AGGACTTAAT AATATCCATC CTGAAATTGT AAAATTAATA
GGAAAATTAA GATATAGAGC AAGTTATGGC CAGAATGCAT TAGCGCATTC TTTAGAAGTG
GCACATTTAG CTGGAATCAT AGCAGCTGAG TGCGGCGGGG ATGAAAAATT AGCAAGAAGA
GCTGGAATTT TACACGATAT AGGCAAGGCT TTAACGCATG AATTTGAAGG ATCGCATGTA
GATTTAGGAG CCGAACTTTG CAAAAGATAT AAAGAACATC CTGTTGTGAT TAATGCAATC
TATGCTCATC ATGGGCATGA AGAAGCATTT AGCATAGAAT CAGCCGCAGT TTGTACAGCA
GATACGCTAA GTGCAGCCAG ACCTGGTGCA AGACGCGAAG TTTTAGAAGC CTTCTTAAAA
AGAGTGAGTG AACTTGAAGA TATAGCAAAA GGTAAAGAAG GGGTTAAAAA AGCATATGCA
ATTAATGCTG GTAGAGAAAT TAGAGTTATT GTTAATGCAA AATTAGTTAA TGATGATGAA
TCAGTGCTTT TGGCTAAAGA AATAGCTGAG GAAATTCAAG AAAAAGTTCA ATACCCTGGC
GAAATAAAAG TCAATGTCAT CAGAGAGCTT AGAGCTATTG ATTTTGCAAG ATAA
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| Protein sequence | MIEILVALIA VFIGGGIGYV VAKKINDANF NIFLEQAKAK AKAIEYEAEL TLKDAKNSVA
EAEFTAKKKF DDKIQKLQKE HSIKLEELNK KEQNLHYQEK LHEENKNKLA KEQQTIKALH
EENENLKQNY ETKLSEVLKI LEHSAGLTQE EAKNIVLQKV EENSRAEIAH IVRKYEEEAR
NEAKRKANFI LAQATSRFAG EFAAERLINV VNIKNDELKG RIIGKEGRNV KTLEMVLGVD
IIIDDTPGAI IVSCFNLYRR AIATKVIELL VEDGRIQPAK IEEIHEKVCK EFEDNILEEG
QTIVMDLGLN NIHPEIVKLI GKLRYRASYG QNALAHSLEV AHLAGIIAAE CGGDEKLARR
AGILHDIGKA LTHEFEGSHV DLGAELCKRY KEHPVVINAI YAHHGHEEAF SIESAAVCTA
DTLSAARPGA RREVLEAFLK RVSELEDIAK GKEGVKKAYA INAGREIRVI VNAKLVNDDE
SVLLAKEIAE EIQEKVQYPG EIKVNVIREL RAIDFAR
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