Gene Cla_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_1165 
Symbol 
ID7410329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand- 
Start bp1115010 
End bp1115666 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content32% 
IMG OID643718291 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_002575738 
Protein GI222824164 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA TTATAAAAAT TTCAAATTTA AATCGTAATT TTAATGAAGT TAAAGCTTTG 
CAAAATATCA ACCTAGAAGT AAAGCAAGGT GAATGGCTAG CCATCATGGG TCCATCGGGT 
TCAGGTAAAT CAACACTTTT AAATATACTT TCTTTGATGG ATACTCAAAG TAGTGGGGAG 
TATTTTTTAG ATGATAAAGA AGTTGGAAAT TTAAGCGAAG AAGAAAAAAG CGTGATTAGA 
AGAGAAAAAA TAGGTTTGAT TTTTCAGCAA TTTCATTTAA TACCTTATTT AAATGCTCTA 
GAAAATGTTA TGCTAGCTCA GTTTTATCAC TCAAGTATAG AACAAAAAGA CGCTATAATG 
GCACTAGAAA AAGTAGGACT TTCACACAGA CTTACGCATT TACCAAGCCA ATTAAGTGGC 
GGGGAGCAAC AAAGGCTATG TATAGCAAGA GCTTTAGTGA ATGATCCTGA AATTTTATTA 
GCAGATGAGC CAACTGGAAA TTTAGATGAG GCAAATGAAA AAAACATTTT AGAGCTTTTT 
TGTAAATTAA AACAAGATGG CAAAACCATA GTTTTAATCA CTCATAATCC AGATCTAGCT 
ACCTTTGCTG ATAGAACTAT CATTTTAAGC CATGGAGTGA TGAAAAGTGA AAATTAA
 
Protein sequence
MKNIIKISNL NRNFNEVKAL QNINLEVKQG EWLAIMGPSG SGKSTLLNIL SLMDTQSSGE 
YFLDDKEVGN LSEEEKSVIR REKIGLIFQQ FHLIPYLNAL ENVMLAQFYH SSIEQKDAIM 
ALEKVGLSHR LTHLPSQLSG GEQQRLCIAR ALVNDPEILL ADEPTGNLDE ANEKNILELF 
CKLKQDGKTI VLITHNPDLA TFADRTIILS HGVMKSEN