Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_1155 |
Symbol | mutS |
ID | 7410319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 1102348 |
End bp | 1104543 |
Gene Length | 2196 bp |
Protein Length | 731 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 643718281 |
Product | recombination and DNA strand exchange inhibitor protein |
Protein accession | YP_002575728 |
Protein GI | 222824154 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1193] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | [TIGR01069] MutS2 family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00051962 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAATT TTTTAAAAAA ATTAGATCTT GATGTTTATG TGACAGAATT TAAAGAATTG TTTGCTAGAG ATAAAGAGAT ATTTTTACAA GGTGATAGCA AACTTCATTT TAAAAGACTT AATGAACTTT CTTTGATAGA ATTTAACCCA CCTCCTGTGA TAAAAGATTT AAACTCTAGC TTAATGCATC TTGGCAAACA AGGGATTTTG CATTTAGAGC AAAGTTTTGA ATTTATTAAA ATTTGTATGT ATTTTAAGTA TTTAAAGAGC TTAAAATTTG AAGAAAGCTT AAAAGAATGG CTTTTAAAAA TAGAAATTCC ACAAGCTATT TTAGAACTTT TTGAGTATTT TGATGAAAAG GGTGAGATAA AAGAAAGCAT AGATGAAAGA CTTGTAAATT TAAACTTAGC ATTAAAAATG AAAAAAGAAA GTTTAATAGC TGAGTTTAAA AAACTAACTT ATACAAAAAA TCTTAGTCCA TATTTAATAG ATACGCAAAT TCATCTTATA AATGGCATGG AAGCTTTGCT TTTAAGGGGT GGTTTTAACC ATGCTTTAAA AGCAAAAATC ATAGGTAGAA GCAGTGGTGG TGGATTTTAT GTGGTGCCTT TGAGTGTGGA AAAAATTCAA AGCCAAATTG ATGAAATTAA AGATGCTAAA GAAGAAATTT TTTATGAATA TGCTAAAAAA ATTAGTTTAA TTTTTAGTAA AAATTTGATG TTTTTAAAAT TTATAAACAA TGCTTTTGAT TTGTTTGATC ATTATAGTGC TAGGGTTTTG ATGGCTAAAA AGCATGATTA TGAGTTTATT TTAACAGATA ATTCTAATAA TTTAAATTTA TATGATTTTG CTCATCCTGT ATTAAAAAAT GCAAAAAGTG TAAATATAGA ATTTAACAAA AAAGTTTTGA TCATCACAGG GGTTAATGCG GGTGGAAAAT CTATGCTTTT AAAAGGAATT TTAAGCGCTG CTTTACTTGC AAAATACTTA CTTCCTATGA AAATTAACGC ACAAAAAAGT CAAATCGGGC ATTTTAAAGA ATTTGATGCG ATTTTAGAAG ATCCGCAAAA TGTAAAAAAT GATATTTCTA CTTTTGCAGG AAGAATGTTG CATTTTTCTA AACTTTTAGG CAAAAAATAT TTATTGTTGG GCATAGATGA GATAGAACTT GGGACAGATT TTGAAGAAGC TGCGTGTTTA TATAATGAAT TAATCATAAA ACTTTTAGAA CAAGATAATA AAATCATCAT CACAACTCAC CACAAACGAC TTGCTATGCT TTTGGCTAAA AATTCACAAG TAGAACTCAT CGCTGCTTTG TATGATGAAG AATTATCTCG CCCAAAATAT GAATTTTTAA AAGGAACCAT AGGTAAATCT TATGCTTTTG AAACGGCTTT AAGATATGGC ATAAGTGCAA ATTTAGTGCA AAATGCTAAA AAAATTTATG GAGAAGATAA AGAAAATTTA GAAGAAATGG TAAGTAAAAA TATCAATCTT GAACTTTCTT TACGCAAAAA AAATGAAGAA CTTGAAAAAA AAGAAGCAAA GGTAGATGAA ATTTTACTTT CACTCAAAGA TCAAAAAGAA AAAAATGAAC AAGAATTTAA AACAATCATT TCTAATTTGG AATTTAAATA TCACAAAGCT ATAGAAGAGG CTAAAAAAAC TATAAATTTA AAAGATATTA AAGAAAAACA AAGAAGTTTA AATAAAGCTA ATGAGCTTAA AAAAAGCATT GTTTTACCAA GTATGAAGCA AAATGATGAG CTTAGAGTGG GGGATTTTGT AAAATATGAA AAAATCAAAG GTAAAATCAC TGCTATTTCA AAAAATGATG CGATGATTCA AAGCGATGGA CTTAGCTTGC GTGTGCCATT AAAACTGCTT AAAAAAACCA ATCACACACA TACCCAAAAA GCAAAATCAA GCATAAGCAT TACAAGGCCA AATACTTTAA GTATGACTTT GGATTTGCAT GGTTTAAGAA GTGATGAAGC ACTTGATAGG CTTGATAAAT TTATATCAGA TGCTCTAATA GCTGGTTTTG ATGAGGTTAA AGTTTATCAT GGTATAGGCA CAGGAAAGCT TGCTTTTGCG GTGAAAGAAT TTTTAAAAGC TCACAAAAGT GTAAAAAGCT TTAATGATGC TCCTTATAAT CAAGGTGGAT TTGGAGCTAA GATTGTAAAA CTTTAA
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Protein sequence | MQNFLKKLDL DVYVTEFKEL FARDKEIFLQ GDSKLHFKRL NELSLIEFNP PPVIKDLNSS LMHLGKQGIL HLEQSFEFIK ICMYFKYLKS LKFEESLKEW LLKIEIPQAI LELFEYFDEK GEIKESIDER LVNLNLALKM KKESLIAEFK KLTYTKNLSP YLIDTQIHLI NGMEALLLRG GFNHALKAKI IGRSSGGGFY VVPLSVEKIQ SQIDEIKDAK EEIFYEYAKK ISLIFSKNLM FLKFINNAFD LFDHYSARVL MAKKHDYEFI LTDNSNNLNL YDFAHPVLKN AKSVNIEFNK KVLIITGVNA GGKSMLLKGI LSAALLAKYL LPMKINAQKS QIGHFKEFDA ILEDPQNVKN DISTFAGRML HFSKLLGKKY LLLGIDEIEL GTDFEEAACL YNELIIKLLE QDNKIIITTH HKRLAMLLAK NSQVELIAAL YDEELSRPKY EFLKGTIGKS YAFETALRYG ISANLVQNAK KIYGEDKENL EEMVSKNINL ELSLRKKNEE LEKKEAKVDE ILLSLKDQKE KNEQEFKTII SNLEFKYHKA IEEAKKTINL KDIKEKQRSL NKANELKKSI VLPSMKQNDE LRVGDFVKYE KIKGKITAIS KNDAMIQSDG LSLRVPLKLL KKTNHTHTQK AKSSISITRP NTLSMTLDLH GLRSDEALDR LDKFISDALI AGFDEVKVYH GIGTGKLAFA VKEFLKAHKS VKSFNDAPYN QGGFGAKIVK L
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