Gene Cla_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_1040 
Symbol 
ID7410774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp995366 
End bp995770 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content31% 
IMG OID643718166 
Productconserved hypothetical protein (DUF583 domain protein) 
Protein accessionYP_002575613 
Protein GI222824039 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.468261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATCT TTAATAAAGG CTCTATTGCT ACAGTATCCG AAACTACAGT CATTTCAAAC 
GGAGCAAAAA TAGAAGGAAA ATTTTATTTT GATTCTATGC TTCATTTAGA TGGAGAGATT
ACAGGTGTGA TTGATTCTTC TAATGTGATA GTAATAGGCA AAAGTGGTGT TTTAAAAGGA
CAAGTTAAGG CAAACAAGAT AGTGATTAAT GGGGTTTTTG AAGGAGAAAT GCAAGTTGAT
TCTTTAGAAA TTTTATCCGG TGGTGTGCTT AATGGTAATA TTATAGTTAA ACAATTAAGT
ATTGAAAATG GTGGAAAATT TAATGGAAGC AGTAAAATAA TCGAAAAAGA TGAAGAGCCT
ACAACTATTG ATGTGAGTAT AGAAAATTCA GAAAATGCAA GCTAA
 
Protein sequence
MAIFNKGSIA TVSETTVISN GAKIEGKFYF DSMLHLDGEI TGVIDSSNVI VIGKSGVLKG 
QVKANKIVIN GVFEGEMQVD SLEILSGGVL NGNIIVKQLS IENGGKFNGS SKIIEKDEEP
TTIDVSIENS ENAS