| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0988 |
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| Symbol | cmeF |
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| ID | 7410723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 943977 |
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| End bp | 946991 |
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| Gene Length | 3015 bp |
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| Protein Length | 1004 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 643718115 |
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| Product | integral membrane component of efflux system |
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| Protein accession | YP_002575562 |
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| Protein GI | 222823988 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTATCGTT TTGCTATTAA TAATCCTATT GCTGTTTTGA TGTTTTTTAT CGCTTTGGTG
ATTTTTGGTA CTTTTTCTAT TTTTAGTATG CCTATTAATC TTTATCCAAA AGTAGATATT
CCTTTGATTA AAATTACCAC AACCACCAAT GGAGATTTAA AATTTATAGA ATCTAAAATA
ACCAAAGAAA TAGAAAACGC AATTTCAGAT GTACAAGGGA TAAAAAATAT CAATTCTACA
AGTTATAATA ATTTTTCTAT TTCTGTTGTT GAATTTGAAT TAGGAAAAAA CTTAGAAGTA
GCTGCAAATG ATATTAGAGA TAAACTTAAT ACTATTAATC TTCCAGCAAA GCCAACCTTA
GAAAAAATAT CCCCTGATGC AGGATCTGTT GTATCATTAT TTTTAAATTC TAAAGATCAT
TTAAAACTTA TGCGTAAGAT CGACAATGAT ATAAAACCAT TTTTACAGAA AATTTCAGGA
GTTGGAACGA TCAATGATAT AGCCTTTTTA AAACCACAAG TTCAAATCAA ACTCTTGCCT
AATGCTTTGC AAAAATACCA CATTAACGCA CTTGATGTAG CTAAAATCAT CCAAAGCCAT
AATTTTAAAC AATATCTAGG TGAATTTGAA AATTCAAAAG ATAATTTTAC TATCAAAGGA
TATTTTGAAG CACAAAATTT AAAAGAGTTG GAAAATATAC GTATTTTTAG TGGAATATTT
TTAAAAGATA TAGCAAATAT TAGCTATGGC TTAGAAGATC AAAAGCAGTT TGCAATGCTT
GATACAAAAG ATGGGGTATT GCTTGAACTT AATAAAATTT CTGGTTATAA CTCCTTAAAA
GTTATAGAAA ATATCAAAAA TTCTTTAAAA ACATTGCAAA CAATAGCAGG CAATGAGATA
GAAATTAAAA TAGTTTATGA TAAAAGCCAA AACATCTTAA AACATATCAA TCAAGTTATT
TTTGATATGG TTTTTGGAGC GATTTTGACA CTTTTAATAG TGTATGTATT TTTAAGAAAT
ATCAGTGCGA CTATTTTAGC TTTTATTGTT TTACCAACTT CGATTATTTC TAGTTTTTTT
CTCATTAATC TTTTAGGTTA TGATATTAAT CGCTTAACCA TTATAGCTCT TACTTTAAGT
ATAGGAATTT TTATAGATGA TGCTATAGTC ATCATTGAAA GTATAGCCAA AAAAGCAAAA
ACACTCCCTC CTTTGCAAGC TTCGTTTGAA GGGATCAAAG AAATAGGCTT TAGCGTTTTA
AGCATTAGTG CGGTTTTATT GTGTGTGTTT ATACCTATAG CTTATATGAA TTCAGTTCCT
GGTTTATTTT TTAATGTATT AGCTACTAGT GTTGCTTCTG GTGTGATTAT AAGCTATCTT
GTAAGTGTAT TTTTAATACC TACCTTAAGT GCTAGATTTT TAAATACTAA CGAAAGTACA
TTTTATAAAA AAAGTGAATT TTTATTTATC AAACTTGACT TATTTTACGA AAAACTACTT
TATAAAGTTT TAGCTAATAA AATTAAATTT ATCCTATCAA CACTTGTTAT AATTATTTTA
TGTTTTTCTT TAGCTCCTAA AATAGGCTTG GATTTTTTAC CTATAGAAGA AGATAGTGAA
ATACAAGTTT TACTAGAAAG CAAAAACGAC TTATCTTTAG AAGCTATGAA AGAAAAAAGT
TTAAAAGTAT ATGAAAATAT AAAGCAAGAT CCAAGTGTTG CTTATGCATA TTTACTTATA
GGATATAATG ACGCAAAGGA AATTAAAAAA GCGAAAATTT ATGTGAAATT AAAACCTTTA
AATGAAAGAA AATTCAGACA GCCTAAGCTT ATTAGCCTTT TTCAAGAAAA ATTAAACTCC
TATGAAGACT TAAAAATAAA AGTTTTAGAA CTCCCTAAAA TAGAAGGAGC AGGCATTGAA
GATCCGGTTC AAATTCAAAT TTTAGGTGAT GATTTAAAGT CAATAAAAGA AGCTATTGAT
AGAATGAAAG AAGTATTTTC AAAACATGAA GGCTTTGTTG CTATAGATGA TAATGAAGGG
GATTTAAAAG AAGAAATTGC TATTAGTATT AATAGGGAAA AAGCTGCCAA ACTTGGTATT
AACCCTCAAG AGCTTGCTTA TGTCTTGGCT TATTCCTTTG GAAATTTAAG CGTTGGAAAT
ATGGATTATA AAAATTTTAA AGATGAAATT ATCCTTAGCT TTGATGAAGC TTTTAAACAA
AATCCAACCA GTTTAGAGCT AATAGAACTT AAAAATCACA ACAATGAAAG TATAAAACTT
GCTAGCATTG CTAACTTTTC TTACAAAAAA GATCTTTCCT TAATTAACAG GCACAATAAA
ACTACTAGCA TAAAACTCAC TTCAAGCATA GAAAACATTT CTCTAGGTGA AGTAAGAAAA
ATTTTTGAGT CCAATTTAGC TTATATTTTA GGAAAAAATA ACCTATCTTT TGCTTATTCT
GGCTTTTTGG ACTTTTTAGA TGATACCATT AGTGGATTTT TGTTTTCTAT ATCTTTGGGA
ATGATTTTGA TTTATCTAAT CCTTGCTTCT TTGTATTCAA GTTTAATACT TCCTTTAATC
ATCATGATAA GCATGCCTTT GGCTTTTGGT GGAGCTTGTT TTGGAATTTT TATCACAGGA
AATCACTTTT CTTTATTTGT GCTTGTAGCT ATTATTTTGC TTTTTGGAAT GGTAGGAAAA
AATGCTATAT TATTAGTGGA TGTAGCTAAT AAAAAATGCG ATGAAGGTAT AGAAGTAGAA
AAAGCACTAA TTTATGCAGG AAAAAGTCGT TTAAGAGCCA TTTTAATGAC AACTTTTGCG
ATGATTTTTT CCATGCTTCC ACTAGCACTT TCAAAAGGTT CTGGCTTTGA AGGAAATTCT
CCTATGGCTA TTGCTATTAT ATTTGGTCTT ATTAGCTCAA CCTTACTTAC ACTTTTAGTA
GTGCCAGCTT TATTTAAATT TGCTCATAAT TTAGATATGA AAATTAAAAA AATCTACCAA
AGAGATAAAA TTTAA
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| Protein sequence | MYRFAINNPI AVLMFFIALV IFGTFSIFSM PINLYPKVDI PLIKITTTTN GDLKFIESKI
TKEIENAISD VQGIKNINST SYNNFSISVV EFELGKNLEV AANDIRDKLN TINLPAKPTL
EKISPDAGSV VSLFLNSKDH LKLMRKIDND IKPFLQKISG VGTINDIAFL KPQVQIKLLP
NALQKYHINA LDVAKIIQSH NFKQYLGEFE NSKDNFTIKG YFEAQNLKEL ENIRIFSGIF
LKDIANISYG LEDQKQFAML DTKDGVLLEL NKISGYNSLK VIENIKNSLK TLQTIAGNEI
EIKIVYDKSQ NILKHINQVI FDMVFGAILT LLIVYVFLRN ISATILAFIV LPTSIISSFF
LINLLGYDIN RLTIIALTLS IGIFIDDAIV IIESIAKKAK TLPPLQASFE GIKEIGFSVL
SISAVLLCVF IPIAYMNSVP GLFFNVLATS VASGVIISYL VSVFLIPTLS ARFLNTNEST
FYKKSEFLFI KLDLFYEKLL YKVLANKIKF ILSTLVIIIL CFSLAPKIGL DFLPIEEDSE
IQVLLESKND LSLEAMKEKS LKVYENIKQD PSVAYAYLLI GYNDAKEIKK AKIYVKLKPL
NERKFRQPKL ISLFQEKLNS YEDLKIKVLE LPKIEGAGIE DPVQIQILGD DLKSIKEAID
RMKEVFSKHE GFVAIDDNEG DLKEEIAISI NREKAAKLGI NPQELAYVLA YSFGNLSVGN
MDYKNFKDEI ILSFDEAFKQ NPTSLELIEL KNHNNESIKL ASIANFSYKK DLSLINRHNK
TTSIKLTSSI ENISLGEVRK IFESNLAYIL GKNNLSFAYS GFLDFLDDTI SGFLFSISLG
MILIYLILAS LYSSLILPLI IMISMPLAFG GACFGIFITG NHFSLFVLVA IILLFGMVGK
NAILLVDVAN KKCDEGIEVE KALIYAGKSR LRAILMTTFA MIFSMLPLAL SKGSGFEGNS
PMAIAIIFGL ISSTLLTLLV VPALFKFAHN LDMKIKKIYQ RDKI
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