| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0598 |
|---|
| Symbol | |
|---|
| ID | 7410664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | - |
|---|
| Start bp | 569303 |
|---|
| End bp | 570031 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 643717729 |
|---|
| Product | amino acid ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_002575181 |
|---|
| Protein GI | 222823607 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.00132309 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAA TAGAAAATTT AGTTAAAAAA TACGGAGATT TAGAAGTTTT AAAAGATATT
AGTGTTGAAG TACACAAAGG TGATATTATT GCTATTATAG GGCCTAGTGG AGGTGGTAAA
AGTACCTTTT TACGCTGTTT AAATAAACTT GAAACACCAG ATAGTGGTAA TATTTATATC
AATGATGTTA ATGTACTTGA TAACAAAGCA GATATCAATC AAATTCGTCA AAAAGTAAGT
ATGGTATTTC AACACTTTAA CCTTTTTAAT AATAAAAATG TTTTAGAAAA TTTATGTCTA
GCTCCTGTGC AAACTAAAAT CATGAGCAAA GATGAGGCTA TAAAAAAAGC GAGAAAATTA
CTTGAAAAAG TTGGATTAAG TGATAAAGAA AATTATTTTC CCCATAAACT TTCAGGCGGA
CAAAAACAAC GCATTGCTAT AGCAAGATCT TTGATGATGA ACCCTGATGT GATTTTATTT
GATGAGCCAA CTTCAGCCCT TGATCCTGAA ATGATAGGTG AAGTTTTAAA TATCATGAAA
GAAGTAGCTA AAGAAGGACT TACCATGCTT GTAGTTACTC ACGAAATGGG TTTTGCAAGA
AATGTAGCTA ATCGAATTTT TTTCATGGAT AAAGGCATTA TAGCAGTAGA TGAGTGTCCC
AAAATAGCCT TTGAAAACCC AAAAAATGAA AGATTGAAAG AATTTTTAAA TCAAGTTTTA
AATCACTAA
|
|---|
| Protein sequence | MIKIENLVKK YGDLEVLKDI SVEVHKGDII AIIGPSGGGK STFLRCLNKL ETPDSGNIYI
NDVNVLDNKA DINQIRQKVS MVFQHFNLFN NKNVLENLCL APVQTKIMSK DEAIKKARKL
LEKVGLSDKE NYFPHKLSGG QKQRIAIARS LMMNPDVILF DEPTSALDPE MIGEVLNIMK
EVAKEGLTML VVTHEMGFAR NVANRIFFMD KGIIAVDECP KIAFENPKNE RLKEFLNQVL
NH
|
|---|
| |