| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0548 |
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| Symbol | trmE |
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| ID | 7411108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | - |
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| Start bp | 523079 |
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| End bp | 524407 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 643717679 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_002575133 |
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| Protein GI | 222823559 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGACA CTATAGCTGC TATAGCCACA GCCCATGGAG TGGGCTCTAT AAGTATCATT
AGAGTAAGTG GAGATCAAGC CTTAGAATTT GCTCTTAAAT TTACCCGCAA AGAAAAACTC
ACACCCCGCT ACGCACATTT ATGCAAAATT TATAAAAACA ATGATGATTT TTTAGATGAA
GCTTTAGTGA TTTATTTTAA AGCACCCTAC TCTTTTACAG GAGAAGATAT AGTAGAATTT
CAACTTCATG GGGGTTTTTC TTTGAGTGAA ATTTTACTTG ATGAGCTTGT TTTAGCAGGA
GCGCGTCTTG CTAACCCTGG AGAATTTAGT AAAAGAGCTT GCTTAAATGG TAAAATGGAT
CTTTTAAAGG CTTTAAGTAT ACAAGATGCC ATCATGTCAA AATCAGCATG TGCTGCAAAT
ATCATAGCAA AAAATATTAA AGGCGATTTA AGTAAATTTT TAAATACCAT TAGAATAGAT
CTTGTTCAAA CCCTTGCTTT TGTAGAAACT AGCATTGACT ATGCAGATGA TGACTTACCA
CAAGATTTAC TTGATCAAAT CATTACTATG TGTGAAAAAA ATTCAAAACT TTTACGCGAT
ATAGTAGATA TTTCTTTAAG TAAAAAAGGA CTTATAGAAG GCTTTAAAGT TGCTATTATC
GGCAAGCCAA ATGCGGGAAA AAGTTCCTTG TTAAATTCGC TTTTAGCATT TGATAGAGCC
ATTGTTTCTG ATATTGCAGG CACCACAAGA GATCGTATCG AGGAAAGTTT AAAAATAGGC
TCACATTTAA TCAAAATCAT CGACACAGCA GGTATAAGAA ATGCAGATGA TGAGATAGAA
AAAATCGGGG TTCACTTAAG CTATGAAAGC ATTAAAGAAG CAGATATTAT CATAGTTGTA
TTTGATGGAT CTAAAGAATT TGAAGAAGAA GATGAGCGAA TTTTACAAGC TTTAAAAGAT
TGTGACAAAA AAATCATTTA TGTTTTAAAC AAAAGCGATC TAACCACCAA ATTTGAACAT
GAAATTAGTA CTTCTTGTAT ACGCATTTGT GCTCAAGAAA ACACCCAAGC CATTAAGGAA
AATTTAAATG AGTACTTAAA TACTTTAGAT GGCGATGGAA TGCTAATTAG CAATACCTTA
ATACTCAATG CTTGTAAGAA TGCTAGCGAA GCTATTTTGC GCGCAAGGGA TTTATTAAAA
GAAAGTTCTT TAGAACTTTT TGCTTTTGAA CTAAATTTAG CCATAGGAGA GATAGCCCAA
TTTACAAAAG ATTTTGAAAG AGATGAAATT TTAGATGCTA TGTTTAGTAA TTTTTGTTTA
GGCAAATAA
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| Protein sequence | MNDTIAAIAT AHGVGSISII RVSGDQALEF ALKFTRKEKL TPRYAHLCKI YKNNDDFLDE
ALVIYFKAPY SFTGEDIVEF QLHGGFSLSE ILLDELVLAG ARLANPGEFS KRACLNGKMD
LLKALSIQDA IMSKSACAAN IIAKNIKGDL SKFLNTIRID LVQTLAFVET SIDYADDDLP
QDLLDQIITM CEKNSKLLRD IVDISLSKKG LIEGFKVAII GKPNAGKSSL LNSLLAFDRA
IVSDIAGTTR DRIEESLKIG SHLIKIIDTA GIRNADDEIE KIGVHLSYES IKEADIIIVV
FDGSKEFEEE DERILQALKD CDKKIIYVLN KSDLTTKFEH EISTSCIRIC AQENTQAIKE
NLNEYLNTLD GDGMLISNTL ILNACKNASE AILRARDLLK ESSLELFAFE LNLAIGEIAQ
FTKDFERDEI LDAMFSNFCL GK
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