Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0123 |
Symbol | |
ID | 7411355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 106359 |
End bp | 107237 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 643717259 |
Product | conserved hypothetical protein, putative transcriptional regulator (AraC family) |
Protein accession | YP_002574740 |
Protein GI | 222823167 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 0.855779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGTTT TTCCAAAAGA TTTTGAAAAA GTGAGTCAAA AAGTTTTACA TAATTCTTTA TTTTCTTTGT GTTATTATCA AAAACAACTA TCAAGCGATA TAAATCAAGA AGTGGTATTT AAAGACTATG CTTTGGTTTT TATATTAGAA GGTTCTAAAA GTATTTATAC TATTGATAAT CATTTTAAGG CAAACAAAGA TGAAATTATT TTTTTTACAA AAAACTCTTT TTCCATTAGA GATTATTTAA ATGAAGCAAA TATATATAAA TCTGTTATTT TGTGCTTTAA AGAAAGTATT TTAATAGAAC TTGTTTTTAA ATATCAAGAT TTAATTTCTA CATTAAACTC TTTGGAATAT TCCAAGAGCT TATTTAGTTT AAAATCAGAT TTAATAACTA AAAGTATTTT TCAATCTTTT TTACCTTGCA TAGGCGCTTC TAAAAACGGT GAATTTTTAC TAAGATTAAA ATTTGAAGAA TTATTTTTGT CTTTATTATA CAGCGAAGAC AATGCAGAAT TTCTTGCTTT TTTAAAAGCC ATTTTAAGTG GTTTTAAATT AGATCTTTAT CAGATGTTTG CATATTGTAA AAATGATTTT GAAAATGTAG CTTCTATGGC TAAATTTAGC AAAATGGATA TTGCTAGTTT TAGTCGAAAT TTCAAGCAAA GTTTTGGGAT TAGTCCTAAA GAGTGGCTTG ATAATAAGCG CTTTGAGAAG GCTAAATTTT TATTAGAATT TTCCACTAAA AATATTACTC AAATTTGTCA TGAGCTTGGA TTTAATTCTC CTGCTTGGTT TATAGCAAGA TACAAAAAAA GATATGGTAT TACTCCAAAA CAAGAGCAAA AATCAAAAAA CTTATATTTT TTATCCTAA
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Protein sequence | MLVFPKDFEK VSQKVLHNSL FSLCYYQKQL SSDINQEVVF KDYALVFILE GSKSIYTIDN HFKANKDEII FFTKNSFSIR DYLNEANIYK SVILCFKESI LIELVFKYQD LISTLNSLEY SKSLFSLKSD LITKSIFQSF LPCIGASKNG EFLLRLKFEE LFLSLLYSED NAEFLAFLKA ILSGFKLDLY QMFAYCKNDF ENVASMAKFS KMDIASFSRN FKQSFGISPK EWLDNKRFEK AKFLLEFSTK NITQICHELG FNSPAWFIAR YKKRYGITPK QEQKSKNLYF LS
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