Gene Cla_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_0123 
Symbol 
ID7411355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp106359 
End bp107237 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content25% 
IMG OID643717259 
Productconserved hypothetical protein, putative transcriptional regulator (AraC family) 
Protein accessionYP_002574740 
Protein GI222823167 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.855779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGTTT TTCCAAAAGA TTTTGAAAAA GTGAGTCAAA AAGTTTTACA TAATTCTTTA 
TTTTCTTTGT GTTATTATCA AAAACAACTA TCAAGCGATA TAAATCAAGA AGTGGTATTT
AAAGACTATG CTTTGGTTTT TATATTAGAA GGTTCTAAAA GTATTTATAC TATTGATAAT
CATTTTAAGG CAAACAAAGA TGAAATTATT TTTTTTACAA AAAACTCTTT TTCCATTAGA
GATTATTTAA ATGAAGCAAA TATATATAAA TCTGTTATTT TGTGCTTTAA AGAAAGTATT
TTAATAGAAC TTGTTTTTAA ATATCAAGAT TTAATTTCTA CATTAAACTC TTTGGAATAT
TCCAAGAGCT TATTTAGTTT AAAATCAGAT TTAATAACTA AAAGTATTTT TCAATCTTTT
TTACCTTGCA TAGGCGCTTC TAAAAACGGT GAATTTTTAC TAAGATTAAA ATTTGAAGAA
TTATTTTTGT CTTTATTATA CAGCGAAGAC AATGCAGAAT TTCTTGCTTT TTTAAAAGCC
ATTTTAAGTG GTTTTAAATT AGATCTTTAT CAGATGTTTG CATATTGTAA AAATGATTTT
GAAAATGTAG CTTCTATGGC TAAATTTAGC AAAATGGATA TTGCTAGTTT TAGTCGAAAT
TTCAAGCAAA GTTTTGGGAT TAGTCCTAAA GAGTGGCTTG ATAATAAGCG CTTTGAGAAG
GCTAAATTTT TATTAGAATT TTCCACTAAA AATATTACTC AAATTTGTCA TGAGCTTGGA
TTTAATTCTC CTGCTTGGTT TATAGCAAGA TACAAAAAAA GATATGGTAT TACTCCAAAA
CAAGAGCAAA AATCAAAAAA CTTATATTTT TTATCCTAA
 
Protein sequence
MLVFPKDFEK VSQKVLHNSL FSLCYYQKQL SSDINQEVVF KDYALVFILE GSKSIYTIDN 
HFKANKDEII FFTKNSFSIR DYLNEANIYK SVILCFKESI LIELVFKYQD LISTLNSLEY
SKSLFSLKSD LITKSIFQSF LPCIGASKNG EFLLRLKFEE LFLSLLYSED NAEFLAFLKA
ILSGFKLDLY QMFAYCKNDF ENVASMAKFS KMDIASFSRN FKQSFGISPK EWLDNKRFEK
AKFLLEFSTK NITQICHELG FNSPAWFIAR YKKRYGITPK QEQKSKNLYF LS