Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_2193 |
Symbol | |
ID | 9146093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | + |
Start bp | 2441105 |
End bp | 2441836 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | regulatory protein TetR |
Protein accession | YP_003637283 |
Protein GI | 296130033 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00970434 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00792169 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACGCG AGCTCGTCGA CCTGCTCTGG CGCGACCACC CCGCCGCGCC GTCGGGGGGC GGCCGCGGAC CGCGCGCCAA GGTGTCGACG ACGCGCACCG TCGAGGAGGC CGTCGCCCTC GCCGACGCCG AAGGGCTGGA CGGGCTGACC GTGCGGCGGC TCGCCGCACG GCTCGGCGTG GCCGCGAACG CCGTGTACAC GCACGTCGGC TCGCGCGACG ACCTGCTCGT GCTCATGGCC GACCTCGTGC GCACGCGCCG GCGGCGCCGC CCGTCCGCGC ACGACGACTG GCGCAGCCGG GTCCGGGAGC TCGCCGAGGC CGAGCTGGCA CTGCACGCCG CGCACCCGTG GCTCGTCGAC GTCACCGACC AGCGCACCGC CTTCGGGCCC GGCACCATCG CCGACTACGA CCACCAGCTC CACGCGCTGG ACGGCACCGG CCTCGACGAC GTCGACCGGG ACGCCGCCCT GACGTTCGTC ACGGACTTCG TGCGTGCGTC CGCACGGGCA CGACGGCCCG CCGCGTACGA CGACCGGATG GCCACCGTGT GGGCGTCGTG GAGCGAGCGC CTGGCGACGT ACGTCGGTGA CACGCACCCG CTCGCGCGTC GCGTGGGTGC GGCTGCGGGA GCCGCCATGC AGGCCCCGGC GAGCGCGGAG CACGCGTGGT GCTTCGGCCT CGAGCGCGTG CTCGACGCGA TCGAGGCGCT CGTCCGCGCG AACGGACGCT AG
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Protein sequence | MARELVDLLW RDHPAAPSGG GRGPRAKVST TRTVEEAVAL ADAEGLDGLT VRRLAARLGV AANAVYTHVG SRDDLLVLMA DLVRTRRRRR PSAHDDWRSR VRELAEAELA LHAAHPWLVD VTDQRTAFGP GTIADYDHQL HALDGTGLDD VDRDAALTFV TDFVRASARA RRPAAYDDRM ATVWASWSER LATYVGDTHP LARRVGAAAG AAMQAPASAE HAWCFGLERV LDAIEALVRA NGR
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