| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_1813 |
|---|
| Symbol | |
|---|
| ID | 9145706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 2020914 |
|---|
| End bp | 2023145 |
|---|
| Gene Length | 2232 bp |
|---|
| Protein Length | 743 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | integral membrane protein |
|---|
| Protein accession | YP_003636909 |
|---|
| Protein GI | 296129659 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00875807 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCG TGTTCGCACG TCTGGGTCGC GCCGTCGCCC ACCACCCGCG TCTGACGGTC
GTCGTGTGGC TGGTCCTCAC GGTGGCGGGC TACGCCTTCG CCGTGCAGGG CGTGCAGGGC
GAGAACCTGT TCGACCGGGT CGCCACGGGC GCGCCCGGCG TCCCGGGTGC CGAGTCGACG
CGCGGCCAGG AGATCCTCGC GGCGGAACGG ACGACGGGCC CCAGTGTCAA CCTCGTGCTG
TCGGGGCTGA ACGTCGCCGA GCCGGACCTG GGTCCGGCGC TCGAGCCCGT GCGCGCGGAC
CTCCTGGCGG TGGAGGGCGT CGCGTCGGTC ATCGACCCGC TCCTGCTGCC CGGTGGCGTC
GAGAACCCCG CTGCGGCGCC GTTGCTCGCG CAGGACCGTC GCGGGTTCCT CGTCGTGGTC
GAGCTGGCGC CGGACCTCGA CGCCGACGTG CGCGCCGCGG CGCTCGACGA CGTCGAGCGG
CGGCTGCGCG CCGTGCCGGA CGACCTGCGC CCGGTCGCCC GTGACGTGCA GGGTCTCGTG
GGTGCCGAGC ACCTCGTCGT CGACGAGATC ACGCAGCAGG CCGAGGACGA CCTGCGCACG
GGCGAGCAGG TGGCGCTGCC GGTCGCGCTG CTCGTGATGC TCGTGGTGTT CGGCGGGTTC
CTCGCCGCGG GGATGCCGAT GGCGGGTGCG CTCGCGTCGA TCGCCGGCGG TCTGGGCGCG
CTGCTGGCGC TCACGTACGT CATGGACGTC GACGCGTCCG TCGTCAACGT CGTCACGGTC
CTGGGGCTGG GTCTGTCGAT CGACTACGGC CTGCTCGTCG TCTCCCGGTT CCGCGAGGAG
CTGACGCGCA CCGTCGGCAC CGACGAGGGC GCGGGTTCGC GCCGGCGCCG GGGGGACGGG
GCGGTCCTGG TCGCGGTGGA GCGGACCATG GCGACCGCCG GACGCACGGT GGTCTTCTCG
GCCGTGACGG TGGCCGTGGC GATCGCCGGC CTGCTGCTGT TCCGTCCCGA CATCCTGCGT
GCGGTCGCCG CAGGTGGCGT CGCGGTCGTG CTCGTCGCGG TGGCGACCGC GGTGACGCTC
GTGCCCGCGC TGCTGACCCT GACCGGCCGG CGCCTGGCGC GTCCGGGTCT GCTGGCGCGC
GTTCCGGGCC TGCGCCGGGC GTCCGACGTG ACCAGCGAGG AGGGGGCGTT CTCTGCCCTC
GCGGGACGGG TGCAGCGCCA CCCGTGGTGG GTGCTGCTCG GCGCGGTGGC GCTGCTGGCG
GTCCTGGCGT CGCCCGTGCT GCGGATGGAC CTGCGCATCA GCGGTCTGGA GCTGCTGCCG
TCCGACGCGG CGCAGCGGGA GTACGTCACG CAGCTCGAGG AGAACTACCC GGCGACCGCG
ACGCCCACGC TCACGGTCGT GGTCGCGGCA CCGCTCGAGG ACGCGACCGC CTGGGCCCAG
GAGGTGGCGG AGCTGCCCGG CGTCGTCACG GTCGACCCGC CCTCGCCCCT CGGCGCCTAC
GTGGTGATCG GCGTGCGCGC GGACACCGAC GACGCGGGCG GCCCGGTCGC GGCGGACGTC
GTGCGCGAGG TGCGGGCGCT CGACGCGCCG TTCGAGCGCT GGGTGGTGGG CCAGGCGGCG
GCACAGCTCG ACTTCACCGC GGCGCTCGTC GACCGCGCGC CTCTCGCGCT CGGGGTCGTC
GGCGGCGCCA CGCTGCTCCT GCTGTTCCTC ATGACCGGCT CGGTGCTCGT CCCGGTGAAG
GCCCTGCTGA CCAACGTGCT GTCGATCGTC GCGTCGCTGG GCGTGATGGT GTGGGTGTTC
CAGGACGGGC ACCTCGAGGG ACTGCTCGGG TTCACGTCCA CGGGCGGCAT CGAGACCTAC
GTGCTCGCGC TGGTGGTCGC GTTCGCCTTC GGGCTGGCGA TGGACTACGA GGTGTTCCTG
CTCGCGCGGG TCAAGGAGCT GCACGACGAG GGCCTGCGGA CGGACGAGGC GGTGCGCCTC
GGCCTGCAGC GCTCGGGCCG GATCATCACG TCGGCCGCCG CGATCATCGT CGTCGTGTTC
GCCGGCTTCG TGACGGGCGA CCTCGTCGTC ATCAAGCAGG TCGGGTTCGC GCTGGCGTTC
GCGGTGCTGG TCGACGCGAC GGTCGTGCGG CTGCTGCTCG TCCCCGCGAC CATGACGATC
CTCGGTCGCG CGAACTGGTG GGCGCCGCGT CCGCTGCGGT GGCTGTACCA GCGGTTCGCG
GTGCTGCACT GA
|
|---|
| Protein sequence | MTRVFARLGR AVAHHPRLTV VVWLVLTVAG YAFAVQGVQG ENLFDRVATG APGVPGAEST
RGQEILAAER TTGPSVNLVL SGLNVAEPDL GPALEPVRAD LLAVEGVASV IDPLLLPGGV
ENPAAAPLLA QDRRGFLVVV ELAPDLDADV RAAALDDVER RLRAVPDDLR PVARDVQGLV
GAEHLVVDEI TQQAEDDLRT GEQVALPVAL LVMLVVFGGF LAAGMPMAGA LASIAGGLGA
LLALTYVMDV DASVVNVVTV LGLGLSIDYG LLVVSRFREE LTRTVGTDEG AGSRRRRGDG
AVLVAVERTM ATAGRTVVFS AVTVAVAIAG LLLFRPDILR AVAAGGVAVV LVAVATAVTL
VPALLTLTGR RLARPGLLAR VPGLRRASDV TSEEGAFSAL AGRVQRHPWW VLLGAVALLA
VLASPVLRMD LRISGLELLP SDAAQREYVT QLEENYPATA TPTLTVVVAA PLEDATAWAQ
EVAELPGVVT VDPPSPLGAY VVIGVRADTD DAGGPVAADV VREVRALDAP FERWVVGQAA
AQLDFTAALV DRAPLALGVV GGATLLLLFL MTGSVLVPVK ALLTNVLSIV ASLGVMVWVF
QDGHLEGLLG FTSTGGIETY VLALVVAFAF GLAMDYEVFL LARVKELHDE GLRTDEAVRL
GLQRSGRIIT SAAAIIVVVF AGFVTGDLVV IKQVGFALAF AVLVDATVVR LLLVPATMTI
LGRANWWAPR PLRWLYQRFA VLH
|
|---|
| |