Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_0959 |
Symbol | |
ID | 9144834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | - |
Start bp | 1062473 |
End bp | 1063894 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | fumarate lyase |
Protein accession | YP_003636065 |
Protein GI | 296128815 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.05909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000463461 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACTGACA TGAACGCTCC CGACGGCGCG GGCGAGTACC GCATCGAGCA CGACACGATG GGCGAGGTGC GCGTCCCGGC GCACGCGCTC TACCGCGCGC AGACGCAGCG CGCGGTCGAG AACTTCCCGA TCTCGGGCAG CACGCTCGAG CGCGGGCACG TCGAGGCGCT GGCGCGCGTG AAGAAGGCCG CGGCGAAGGC CAACGCCGAG CTGGACGTCC TGCCGCAGGA CGTCGCCGAC GCGATCGTCG CCGCCGCCGA CGAGGTCGCC TCGGGCGTGC ACGACGCGCA CTTCCCCGTC GACGTCTACC AGACGGGCTC GGGCACGAGC TCGAACATGA ACACCAACGA GGTCCTGGCG ACGCTCGCGA CGCGCCTGCT GGGGCGCGAC GTGCACCCGA ACGACCACGT CAACGCGTCG CAGTCGTCGA ACGACGTGTT CCCGACGTCG GTGCACGTGG CGGCCACGGC CGGCGTCGTG CGCGACCTCG TGCCCGCGCT CGAGCACCTC GCCGGCGCGC TGGAGGAGAA GGCCACCGCG TGGGCCACCG TCGTGAAGTC CGGCCGCACG CACCTCATGG ACGCCACGCC CGTGACGCTC GGCCAGGAGT TCGGCGGGTA CGCCGCGGCC GTGCGGTACG GCGTCGAGCG CCTGCAGGCC GCGCTCCCCC GCGCCGCGGA GGTCCCCCTG GGCGGTACCG CCGTCGGCAC CGGCATCAAC ACCCCGGCGG GCTTCCCGCA GCGGGTCATC GCGCTGCTGG TCGAGGACAC CGGCCTGCCG CTGACCGAGG CACGGGACCA CTTCGAGGCG CAGAGCTCGC GTGACGGCCT CGTCGAGCTG TCGGGTGCGC TGCGCACCAT CGCCGTGAGC CTGACGAAGA TCTGCAACGA CCTGCGCTGG ATGGGCTCGG GCCCCAACAC CGGCCTCGGC GAGATCGCGC TGCCCGACCT GCAGCCCGGC TCGTCGATCA TGCCCGGCAA GGTCAACCCG GTCGTCCCGG AGGCCGTGCT CATGGTGTGC TCGCGCGTCG TCGGCAACGA TGCGACGGTC GCGTGGGCGG GCGCGAGCGG CTCGTTCGAG CTCAACGTGC AGATCCCCGT CATCGCCTCG GCCGTGCTGG AGTCGATCCG GCTGCTGGCG AACGCGTCGC GCGTGCTGGC CGACCGGACG GTCGCGGGCA CCACGCCCAA CGTCGAGCGC GCCCGCGCGC TGGCCGAGTC CTCGCCGTCG ATCGTCACAC CGCTCAACCG CACGATCGGG TACGAGAACG CCGCGAAGAT CGCGAAGCAC GCCGTGAAGC AGGGCGTGAC GATCCGCCAG GCGACGCTCG ACCTCGGGTT CGTCGAGCGC GGCGAGCTGA CGCTCGAGCA GCTCGACACG GCGCTCGACG TGCTCGCGAT GACGCGCCCG CCGCAGGCCT GA
|
Protein sequence | MTDMNAPDGA GEYRIEHDTM GEVRVPAHAL YRAQTQRAVE NFPISGSTLE RGHVEALARV KKAAAKANAE LDVLPQDVAD AIVAAADEVA SGVHDAHFPV DVYQTGSGTS SNMNTNEVLA TLATRLLGRD VHPNDHVNAS QSSNDVFPTS VHVAATAGVV RDLVPALEHL AGALEEKATA WATVVKSGRT HLMDATPVTL GQEFGGYAAA VRYGVERLQA ALPRAAEVPL GGTAVGTGIN TPAGFPQRVI ALLVEDTGLP LTEARDHFEA QSSRDGLVEL SGALRTIAVS LTKICNDLRW MGSGPNTGLG EIALPDLQPG SSIMPGKVNP VVPEAVLMVC SRVVGNDATV AWAGASGSFE LNVQIPVIAS AVLESIRLLA NASRVLADRT VAGTTPNVER ARALAESSPS IVTPLNRTIG YENAAKIAKH AVKQGVTIRQ ATLDLGFVER GELTLEQLDT ALDVLAMTRP PQA
|
| |