| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_0646 |
|---|
| Symbol | |
|---|
| ID | 9144516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | + |
|---|
| Start bp | 701737 |
|---|
| End bp | 703053 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_003635757 |
|---|
| Protein GI | 296128507 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0223419 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00474804 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGACGACG ACGGACGTGC TGCGCTGCAC GGCGACGCCG CGACGACCCC GCGGGAGGCC
TCGACCACCT TCCCAGACGC ACCGCGGACA CGCGAGGGCC GTGCGGCGGA ACGCGTCCCC
GACCCGTCGC GCGCGGCCCG CCAGGCGCAG ATGCGCACCC ACAACCTGTC GATGACGCTG
GCGCAGGTCG TCGACTCGAC CGCACCCCCG TCGCGCGCGC AGATCGCCGC CGCCACAGGC
CTGGCGCGCG GCACCGTCAC GGGGCTCGTC GACCTGCTCA TCGAGGCGGG CCTGGTGCGC
GAGCTCGACC CGGTCGTCGT CGCACGCGCC GGGCGACCCG CCGTACCGCT CGAGGTCGTG
CGGGGGAGGG TCGCCGGCGT CGGCATGGAG GTCAACGTCG ACTACCTCGG GCTGCGCGCG
GTCGACCTCG CCGGCGGCGT CGTCGCCGAG GCCGTCGAGG CGGCCGACCT GCGCGGCAGC
GACCCCGACG TCGTCCTCGA CCGCCTCGCG GCGCTGGCCG CACCCGTGCT CGCGGGGCTC
GCGACCGACG GCGTCCGCGT CGCGGGCACC GCGCTCGCCC TGCCCGGCCT CGTGGACCGC
GTCACCGGCC CGCTGCGGTA CGCGCCGAAC CTCGGCTGGC GCGACGTCGA CGTCGTCGCG
CGCCTCGCGG CCCACCCCGG CCTCGCCGCC CTGCCGCCGC GGGTCGCCAA CGAGGCCAAC
CTCGCCGCCC GCGCCGAGGC CCACGCGCGA CGCGGCGAGG TGCCGCCGTC GTTCCTCTAC
GTCTCCGGTG AGGTCGGCGT CGGTGGCGCG CTCGTCCTCG ACGGCGAGAT CTTCCTCGGC
CGGCACGGCT GGAGCGGCGA GATCGGGCAC GTCGTCGTCG ACGGCGGCCC CGCCGGCACG
CGGCCGGTGT CGCTCGAGCA GCACGCCGGG CAGGACGCGA TCGCGCAGGC TGCGGGCCTC
GTGACAGGTG CGCCGTTCGC CGAGGTCGCC GAGGCCGTGG CCGCAGGCGA CGCCCGCGCC
CGGGACGCCG TGCACGCGGC GGCGCGCTGG CTCGGCCTCG CGCTGGCCAC CGTCGCCAAC
GTGGTCGACG TCAGCGAGGT CGTGCTCGGC GGCACCTTCG GGCTCGTCTA CGACGAGGTC
CGGGACGTCG TCGCCGACAC GCTCGCGGAC CGCGTCATCT TCGCGCCCTG GTCCGCGCCC
GTCGTCAGCC GGTCGGCGGC GGGCGACTAC CCGGCGATGA CGGGCGGCGC GCTGGCGGTA
CTGCGCACGG TCGTCGCCGA CCCGACCCCC TGGTTCGCGT CGACGACCCC GGTCTGA
|
|---|
| Protein sequence | MDDDGRAALH GDAATTPREA STTFPDAPRT REGRAAERVP DPSRAARQAQ MRTHNLSMTL
AQVVDSTAPP SRAQIAAATG LARGTVTGLV DLLIEAGLVR ELDPVVVARA GRPAVPLEVV
RGRVAGVGME VNVDYLGLRA VDLAGGVVAE AVEAADLRGS DPDVVLDRLA ALAAPVLAGL
ATDGVRVAGT ALALPGLVDR VTGPLRYAPN LGWRDVDVVA RLAAHPGLAA LPPRVANEAN
LAARAEAHAR RGEVPPSFLY VSGEVGVGGA LVLDGEIFLG RHGWSGEIGH VVVDGGPAGT
RPVSLEQHAG QDAIAQAAGL VTGAPFAEVA EAVAAGDARA RDAVHAAARW LGLALATVAN
VVDVSEVVLG GTFGLVYDEV RDVVADTLAD RVIFAPWSAP VVSRSAAGDY PAMTGGALAV
LRTVVADPTP WFASTTPV
|
|---|
| |