| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_0502 |
|---|
| Symbol | |
|---|
| ID | 9144369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 534730 |
|---|
| End bp | 536565 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, SARP family |
|---|
| Protein accession | YP_003635615 |
|---|
| Protein GI | 296128365 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000614607 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0000229515 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCGCATCG GGGTGCTCGG TCCCGTCGTC GCGCACGCCG CCGGCGACGC GTTGACGCTG
CCCCGGCCGC GCTCGCGCGA GGTGCTGGCG GTGCTCGTCG CGGCGGGCGG GCGCACGGTC
CGCACGGACG CGCTGGTCGA CGACCTGTGG GACGGCACCC CTCCGCCGGG TGCGGTCGGG
GCGGTGCGCA CGTTCGTCGC CGAGCTGCGC CGCGCGCTGG AGCCCGACCG GCCCCCGCGC
ACACCGCCGC GCGTCGTCGT CACCCGCGGC CCGGGCTACG CGCTCGACGT CCCGCCGGAC
GCCGTCGACG CGTGGCGCGT GGCGCGGCTG GCGGCCGAGG CCCGCACCGC TCCCCCGGAC
ACCGCGGTGC GTCTGCTCGC CCACGCCCTC GCCGCGTGGC GCGGTGAGCC GTACGAGGAG
CTCGCCGACC GCCCCTGGGT GCAGCCCGAG CGCACCCGCC TGGTGACGCT GCGCGCCGAC
GTCACCGAGC AGCTGGCGGA TGCGCTGCTG GCGACGGGCC GCGCGGTCGA CGTGGTCCCG
CTGCTCGACG CGCACGTCGG CGCGCACCCG TGGCGCGAGG ACGGCTGGCG GCTGCTGGCC
ACGGCGCTGC ACCGCTTGCA CCGGCCGGCG GACGCGCTCG ACGTGCTGCG CCGCGCCCGA
CGCACCCTCG CCGAGGACCT CGGCCTCGAC CCCGGCCCAG CCCTGCGGGA CCTGGAGCAG
CAGGTCCTGG AGCGTCGCGA CGACGACGCG TGGCGCGACG ACAGCCTGTC CGCGCTCGAC
CGCCGCGGCG GGCGCGCGCG GCTGGAGGCG TCGGGCGCGG TCCTCACGAG CCTGGCCGTG
TCGGGTGACC TCGCGACGGT CCGCGCGCAG CGGCTCGCGT CCATCGCGGC GGCCGAGAGG
CTGGGCGACC CGTTGCTGAC GGCGCGGGTG GTCGGCGGCC TGGAGGCGCC GGGGGTGTGG
ACGCGGTCGG ACGACGACGA GCTCGCGGCG GCGGTCGTCG CGGCGGCCGT CCGGACGCTG
CCGCGGGTGA CGGGCAGCCC GGTGACGCGC GGGCGACTGC TCGCGACGAT CGCGATCGAG
GACCGCGGCA CGGCGGCGCG CGAGACCGAG GCGCTCGAGG CCGAACGGAT CGCGCGCGAC
CTGGACGACC GGCACCTGCT GTGCCTGGCT CTCAGCGGGC GCGCGATGCA GCGGTTCGGG
AGCACGGGGC TGGCGGCGGA CCGCGAGCGG ATCGGCGCCG AGCTCGTCGC GACGGCGGTG
TGCGCGGAGT CCACGACGTT CCGGATCGCC GGGCGCATCG TGCGGATGCA GGCGCTGTGC
GCGCTGGGGC GGCTCGACGA GGCGGCGGCG GAGGCCGACG AGGTCGACGC GCTGGCCGCG
TCCGCCGAGC GCCCGCTGGC GACGACGTTC ACCGCGTGGT TCCGCCACAC CTTCGCCGAC
GGGCCGGAGC CGGCGGCGCC CGACGAGATG CCGGGGTTCT CGCACGGGAT CGTCGCGCTG
GCCCGGGTGA CGCGGCTGGT CCGCGACGGC GGCACGCTCC CCGGGCCGGA CGCCGCGGGC
GACCTGGGCC CGTACGCGCC GTGGGTCCGG CCGCTCCTGC TGGTGCGCGC GGGCGACGTC
GACGGCGCCC GCCGGGCCGT GCGTGGGGCA CCGGCGCCGC CGCACGACCT GCTGCAGGAG
GTCGCCTGGG GCCTGCTGCT GACGGCGGCC CGCGAGGCCG GCGCACCCGA CGTCGTCGAC
CGTGCCCGTG ACGCCCTGGC ACCGGCCGTC GACGAGCGTG CGGCGGGCAG CGGCGTCGTC
GACGCGGGTC CCGTCCGCGC GTTGCTGCGG GGCTGA
|
|---|
| Protein sequence | MRIGVLGPVV AHAAGDALTL PRPRSREVLA VLVAAGGRTV RTDALVDDLW DGTPPPGAVG
AVRTFVAELR RALEPDRPPR TPPRVVVTRG PGYALDVPPD AVDAWRVARL AAEARTAPPD
TAVRLLAHAL AAWRGEPYEE LADRPWVQPE RTRLVTLRAD VTEQLADALL ATGRAVDVVP
LLDAHVGAHP WREDGWRLLA TALHRLHRPA DALDVLRRAR RTLAEDLGLD PGPALRDLEQ
QVLERRDDDA WRDDSLSALD RRGGRARLEA SGAVLTSLAV SGDLATVRAQ RLASIAAAER
LGDPLLTARV VGGLEAPGVW TRSDDDELAA AVVAAAVRTL PRVTGSPVTR GRLLATIAIE
DRGTAARETE ALEAERIARD LDDRHLLCLA LSGRAMQRFG STGLAADRER IGAELVATAV
CAESTTFRIA GRIVRMQALC ALGRLDEAAA EADEVDALAA SAERPLATTF TAWFRHTFAD
GPEPAAPDEM PGFSHGIVAL ARVTRLVRDG GTLPGPDAAG DLGPYAPWVR PLLLVRAGDV
DGARRAVRGA PAPPHDLLQE VAWGLLLTAA REAGAPDVVD RARDALAPAV DERAAGSGVV
DAGPVRALLR G
|
|---|
| |