| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_0325 |
|---|
| Symbol | |
|---|
| ID | 9144191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 362128 |
|---|
| End bp | 363135 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | |
|---|
| Product | Helix-turn-helix type 11 domain protein |
|---|
| Protein accession | YP_003635442 |
|---|
| Protein GI | 296128192 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00275048 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0249624 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGTCG ACGTGCGCGC GGACCGTCTG GTGGCCACCC TGCTCCTGCT GCAACGACGC
GGCCGGGTCA CGGCCGCCGA GGTCGCCCGG GAGCTCGAGG TGTCCGAGCG CACCGCGCGA
CGCGACCTCG ACGCGCTGGC CGTGGCGGGG GTGCCGCTGT ACTCGTCGCA GGGCCGCGGT
GGCGGCTGGC GGCTCGTCGG CGGTGCGCGC ACCGACCTGT CGGGGCTGAC GGCCACGGAG
GCGCGTGCGC TGTTCCTCGT CGCCGGGCCC GCCGCGCCCG CGACCCCGGC CGTGCGGACG
GCGCTGCGCA AGCTCGTCCA CGCGCTGCCG GCGACGTTCC GCGACGAGGC CGAGGTGGCG
GCGGCTGCGC AGGTCACGGA CGCCGACGGG TGGGACGGCC CGGCGCCGCC GGACCCGCCC
GGCGCCCTCG ACGACCTGCG CGACGCGGTG GTCCGACGCG TGCAGGTTCA CCTCGGCTAC
GTCGACGCGC AGGGCTGCGC GACGGCGCGG ACCGTGCACC CGCTCGGCGT CGTCGCCAAG
GGCCGGGCCT GGTACCTCGT CGCCGGCACG GACGCCGGGC GCCGCACGTT CCGCGTCGAC
CGCGTGACGT CCGTCGAGCC GACCGGCGAC CCCACGCAGC ACCCACCCGA CTTCGACCTC
GCGGCGGTCT GGCGCGAGAT CACCGACGAG GTGGAGCTGC GCCGTTCGCC CGCGCAGGCC
ACGGCGTGGT GCACCGCCGA CGGGCTGGTT GTGCTGCGGC GCGCGTTCGG TAGTCGGCTC
GCGGTGGGGG CCGCCGCCGA CGACGGGCGG ACCGAGGTCG TCGTCCGCGG CCGCGACCCG
CAGGTGCTCG CGGGCGAGCT CGCGGCGCTC GTCGCGTGGG TCGAGGTCAC CGGGCCGCCG
GAGGTGCGCA CCCACCTGGC GACGCTCGGT GCGACGCTCG TCGAGCGCTA CGGGGCAGGA
GTGGTCACGC CGACGACGCC GGACCGCGAG GAGTGGTCGG ACCGTTGA
|
|---|
| Protein sequence | MLVDVRADRL VATLLLLQRR GRVTAAEVAR ELEVSERTAR RDLDALAVAG VPLYSSQGRG
GGWRLVGGAR TDLSGLTATE ARALFLVAGP AAPATPAVRT ALRKLVHALP ATFRDEAEVA
AAAQVTDADG WDGPAPPDPP GALDDLRDAV VRRVQVHLGY VDAQGCATAR TVHPLGVVAK
GRAWYLVAGT DAGRRTFRVD RVTSVEPTGD PTQHPPDFDL AAVWREITDE VELRRSPAQA
TAWCTADGLV VLRRAFGSRL AVGAAADDGR TEVVVRGRDP QVLAGELAAL VAWVEVTGPP
EVRTHLATLG ATLVERYGAG VVTPTTPDRE EWSDR
|
|---|
| |