Gene Ccur_05940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_05940 
Symbol 
ID8374802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp698132 
End bp699004 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content47% 
IMG OID644993517 
ProductLPS biosynthesis protein 
Protein accessionYP_003150993 
Protein GI256827034 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3475] LPS biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0032299 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.000000000543053 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTATTT CGCTCCGAGA ATATCAACTG TTTGAGCTTA AGATTCTCAA GGAATTTTCT 
GGCATATGCG ATCAACATAA TCTGAATTGG TGGATTGGGT ACGGAACACT CTTAGGCGCT
GCGCGTCATA AAGGGTTTAT CCCGTGGGAT GACGATATCG ATGTGTGGAT GATGCCTGAT
GACTATCTGG CTTTCCGCGA AATTTGTCGC ACTGAACTGA ACAGTGAATA CTATCTGAAT
GTACATTCTT TTAATCCAGC TAATGCGATA ACCTGGCAGT GTCTTGGTGT GCGCAACACC
ACATCGATTC CGCGTAATCA GCTCGATGTT CCGGCTGATT GGGGAGTCTG CATGGATATC
TTCCCCTTGG TTCCGTGCCC TAACCCTGAA ACACCGCGAT TTTCTGGGTT TCTGAAGCGC
ATTCGATCGT TTCAGCGGTT AAGTTCAAAG TATGTTTATG CCAATGATGT ATCGAAGACG
TCAGGTTTGC GTAAGCTGTA CAACAAGTGG CGTGCTTCTG GTTCCGATGA ACAAAACATT
ACGAAATGGC TTGCGGTCGA AAACGCTCTT TTCACTGACA AAGCTAACTT GGCAAGTGGT
TGGGTTACCG ATATTGATTG TGTTGAACCG GCTGATTCCT ATAAGCGCTC TTGGTTCGAT
TCAACGGTTT ATCTCGACTA CGAAGACATG AAAGTGCCTG CTCCAGGCGA GTATCAAAAG
GTGCTTGCGC ACTGTTATGG CGAAGACTGG GCTCAGATTC CTGACGAGTC AAGCGATTTG
CGGTGGTGCC ATTCTGGTGG TGGGTCAGAC GATGTCATAG TGAGTCTTGA TACACCCTAT
ACCGATTATT GGCCTGAGAA TCGCGTCGAC TAG
 
Protein sequence
MGISLREYQL FELKILKEFS GICDQHNLNW WIGYGTLLGA ARHKGFIPWD DDIDVWMMPD 
DYLAFREICR TELNSEYYLN VHSFNPANAI TWQCLGVRNT TSIPRNQLDV PADWGVCMDI
FPLVPCPNPE TPRFSGFLKR IRSFQRLSSK YVYANDVSKT SGLRKLYNKW RASGSDEQNI
TKWLAVENAL FTDKANLASG WVTDIDCVEP ADSYKRSWFD STVYLDYEDM KVPAPGEYQK
VLAHCYGEDW AQIPDESSDL RWCHSGGGSD DVIVSLDTPY TDYWPENRVD