Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_05940 |
Symbol | |
ID | 8374802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | + |
Start bp | 698132 |
End bp | 699004 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644993517 |
Product | LPS biosynthesis protein |
Protein accession | YP_003150993 |
Protein GI | 256827034 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3475] LPS biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0032299 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.000000000543053 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGTATTT CGCTCCGAGA ATATCAACTG TTTGAGCTTA AGATTCTCAA GGAATTTTCT GGCATATGCG ATCAACATAA TCTGAATTGG TGGATTGGGT ACGGAACACT CTTAGGCGCT GCGCGTCATA AAGGGTTTAT CCCGTGGGAT GACGATATCG ATGTGTGGAT GATGCCTGAT GACTATCTGG CTTTCCGCGA AATTTGTCGC ACTGAACTGA ACAGTGAATA CTATCTGAAT GTACATTCTT TTAATCCAGC TAATGCGATA ACCTGGCAGT GTCTTGGTGT GCGCAACACC ACATCGATTC CGCGTAATCA GCTCGATGTT CCGGCTGATT GGGGAGTCTG CATGGATATC TTCCCCTTGG TTCCGTGCCC TAACCCTGAA ACACCGCGAT TTTCTGGGTT TCTGAAGCGC ATTCGATCGT TTCAGCGGTT AAGTTCAAAG TATGTTTATG CCAATGATGT ATCGAAGACG TCAGGTTTGC GTAAGCTGTA CAACAAGTGG CGTGCTTCTG GTTCCGATGA ACAAAACATT ACGAAATGGC TTGCGGTCGA AAACGCTCTT TTCACTGACA AAGCTAACTT GGCAAGTGGT TGGGTTACCG ATATTGATTG TGTTGAACCG GCTGATTCCT ATAAGCGCTC TTGGTTCGAT TCAACGGTTT ATCTCGACTA CGAAGACATG AAAGTGCCTG CTCCAGGCGA GTATCAAAAG GTGCTTGCGC ACTGTTATGG CGAAGACTGG GCTCAGATTC CTGACGAGTC AAGCGATTTG CGGTGGTGCC ATTCTGGTGG TGGGTCAGAC GATGTCATAG TGAGTCTTGA TACACCCTAT ACCGATTATT GGCCTGAGAA TCGCGTCGAC TAG
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Protein sequence | MGISLREYQL FELKILKEFS GICDQHNLNW WIGYGTLLGA ARHKGFIPWD DDIDVWMMPD DYLAFREICR TELNSEYYLN VHSFNPANAI TWQCLGVRNT TSIPRNQLDV PADWGVCMDI FPLVPCPNPE TPRFSGFLKR IRSFQRLSSK YVYANDVSKT SGLRKLYNKW RASGSDEQNI TKWLAVENAL FTDKANLASG WVTDIDCVEP ADSYKRSWFD STVYLDYEDM KVPAPGEYQK VLAHCYGEDW AQIPDESSDL RWCHSGGGSD DVIVSLDTPY TDYWPENRVD
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