Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_05680 |
Symbol | |
ID | 8374776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | + |
Start bp | 667967 |
End bp | 668806 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644993491 |
Product | ribonuclease III |
Protein accession | YP_003150968 |
Protein GI | 256827009 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0033442 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 109 |
Fosmid unclonability p-value | 0.77116 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTACGC ACGATGAACA GCGCGAAAAA CTCGATCGCG CTCAAGAGGT TTTAGGGTAT CGCTTTTCAG ATGAGCACTT TTTGTTATCG GCTATTACGC ATCCCTCTGC AGTTGAGGGC ATGCCGGTTA AGTTTTCCTA TGAACGGCTT GAATTTTTAG GCGATAGCAT TTTAGGGGCT GTCGTTGCTG ATGCCGCATT TCATCGGTTT CCCGATCTTG ACGAAGGCGG CCTGACACGC ATTAAGGTGT CTCTCGTGGC TGGATCTTCG TTATCCCAGG TAGCTAATGA ATTGGGATTT GCCGATTTTA TTATCTTTGG CCAGTCTGAA GCAGGTACTG GTCGTCGTGG TCTGCATTCA GCACTCGAAA ATGTCTACGA GGCTGTGGTG GCCGCTTTGT ATTTGGATGG CGGCATGGAA GTTGCTCGCT CCTTTATTGT TCAAACCCTG CTTGGTTACA TGAGCATTGA CATGGCGCGC GAACCGGAAA ATCCTAAGAG TGCGCTGCAA GAAAAACTGC AGGAGGATGG CATTACTCCT ACCTATAAAC TTATTGAAAC GCAGGGGCCA CCGCATGATC GTACATTTGT TGCAGCGGTA TATGCGGGCC TGCAAGCGCT TGCGCGAGGG GTTGGGCGCA CGAAGAAAGA AGCGGAGAGC AAGGCGGCTC AGACAGCGCT TTCCCATCTG CCCGACGAAA AGCATAAGCG GCATAAAGAT AAGGGTAAAG ATAAAGCTGA ACATCGCAAG AAGGGTGCTA CGAGTCATTC TCAAGATAAC GATACGGGCG AAAAGCCGAT ACCGGATACG GTGGCATCGA ACACGGCAGG GCGGGAGTAA
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Protein sequence | MVTHDEQREK LDRAQEVLGY RFSDEHFLLS AITHPSAVEG MPVKFSYERL EFLGDSILGA VVADAAFHRF PDLDEGGLTR IKVSLVAGSS LSQVANELGF ADFIIFGQSE AGTGRRGLHS ALENVYEAVV AALYLDGGME VARSFIVQTL LGYMSIDMAR EPENPKSALQ EKLQEDGITP TYKLIETQGP PHDRTFVAAV YAGLQALARG VGRTKKEAES KAAQTALSHL PDEKHKRHKD KGKDKAEHRK KGATSHSQDN DTGEKPIPDT VASNTAGRE
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