Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_05300 |
Symbol | |
ID | 8374738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | + |
Start bp | 627040 |
End bp | 628251 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644993454 |
Product | SSU ribosomal protein S1P |
Protein accession | YP_003150933 |
Protein GI | 256826974 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.467971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 133 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCGAAA TCAAGAACCC GTCCGTGATC GATTACGAGG ACGTTCCCGA CGATCAGATG AACGCGATGA TCGATGGTAC GTTGACCGAA TTTGATGAGG GCGATCTCGT CGACGGCACA GTTGTCAAGA TTGAGCGCGA CGAAGTGCTG GTTGACATCG GATTCAAAAG CGAGGGTGTT ATTCCCGCTC GCGAGCTGTC TATTCGCAAA GATGCCGATC CATCTGACAT TGTGAATCTG GGCGATTCTA TTGAAGCGCT GGTGCTGCAG AAGGAAGATA AAGACGGCCG TCTGATTCTG TCCAAGAAGC GTGCTGAATA CGAGCGTGCT TGGATTTCTG TTGAAGAGAA GTTCAAGGCT GGCGAAATCG TTTCTGGTGA GGTTATCGAA GTTGTCAAGG GTGGCCTGAT TCTCGATATC GGCCTGCGCG GCTTTCTGCC CGCTTCCCTT GTTGACTTGC GTCGCGTAAA AGATCTTGAT ATGTATCTGG GCACTCCCCT TGAAGCACGC GTTATCGAAA TGGATCGCAA CCGCAACAAC GTGGTGCTTT CTCGTCGTGT CCTTCTGGAA GAAGGTCGCA AGAACGAGCG CGCCGAAATT CTTTCACGTC TAACCAAGGG CATGCGCCTG AAGGGTACTG TGTCCTCGAT CGTCGATTTC GGTGCCTTCG TGGATCTGGG TGGCATCGAT GGTCTGGTTC ACATTTCCGA ACTCTCTTGG AGCCACGTCA ACCATCCTTC CGAGGTCGTC AAAGTTGGTG ACGAAGTAGA GGTTCAGGTT CTCGACGTCG ACTTGCAGCG TGAGCGCATT TCGCTGGGTC TCAAGCAGAC GACTGAAGAT CCGTGGGTTA AGCTGGTAGA AAGCTATCCA GTTGGAAGCA TTATTGATGG TAAGGTTACC AAGACGGTTC CATTTGGCGC CTTTGTCGAA CTTGGCCCCA ACGTTGAAGG CCTCGTGCAT ATCTCTGAGA TGGCTAACAA GCACATTGAA GCCCCCACGC AAGTTGTGCA TGCGGGCGAT GAAGTGAAGG TCAAGGTCAT GGAGATCAAT ACCGAGCGCC GTCGCATTAG CCTGTCTATG AAGGCTGCTG CTGAGGATCT TGGTATTGAG ATTGCTGTTG CCGAGCCCGA TCCGGCTGCT CTGGAAGAAA AAGCTGCTCG TCAGGCCAAG CGTGCCGCGC GGGAAGCCGA AGAAGAAGAG CAAGAAGATT AA
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Protein sequence | MTEIKNPSVI DYEDVPDDQM NAMIDGTLTE FDEGDLVDGT VVKIERDEVL VDIGFKSEGV IPARELSIRK DADPSDIVNL GDSIEALVLQ KEDKDGRLIL SKKRAEYERA WISVEEKFKA GEIVSGEVIE VVKGGLILDI GLRGFLPASL VDLRRVKDLD MYLGTPLEAR VIEMDRNRNN VVLSRRVLLE EGRKNERAEI LSRLTKGMRL KGTVSSIVDF GAFVDLGGID GLVHISELSW SHVNHPSEVV KVGDEVEVQV LDVDLQRERI SLGLKQTTED PWVKLVESYP VGSIIDGKVT KTVPFGAFVE LGPNVEGLVH ISEMANKHIE APTQVVHAGD EVKVKVMEIN TERRRISLSM KAAAEDLGIE IAVAEPDPAA LEEKAARQAK RAAREAEEEE QED
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