Gene Ccur_02200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_02200 
Symbol 
ID8374428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp268591 
End bp269991 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content50% 
IMG OID644993143 
ProductNa+-driven multidrug efflux pump 
Protein accessionYP_003150633 
Protein GI256826674 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones128 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTACTG AGTCGATTCC CCGTTTGATT GCAGAGTTTT CCATTCCTTC GATTATTGGC 
ATGCTTGCGA ATGGTGCCTA TAACGTTATC GATTCGGTGT TCTTGGGCCA AGCGATGGGT
GAGATCGGTC TGTCGGCCGT GACAGCGGCG ACGCCGGTCA TGATTATTTT TCTTGCTATC
GCTTTATTAG TGGGCAACGG TGGTAATGCA CTCGCTGCTC TGCGTTTGGG GCAAGGCGAT
CGATTGGGAG CCGAACGGGC TCTTGGCAAT ACGGTGTCAC TTTCAGTGGT CTTTTCTCTC
GCGGTTGCTT TGATAGCTTT TATGCCACCG TCAATCGAAA CACTGTTAAC GTTGTCGGGG
GCAACGGTAG AAACATGGGA TGCGGCGCGT ATCTTTATTC AGATACTTTC GGCAGGCTTT
ATTTTGCAGT GTATCGGCAT GGGGGTGAAT AACTTCATCC GTACTGCTGG TGCGCCAAAC
CGCGCGCTTG GCACGATGGT TATTGGGGCA GTGGTTTGCA TTGTTTTCAA TTACCTGTTT
GTTATCGTGT GCAATTTAGG CGTTGTGGGT AGTGCGTGCG CCACGCTGGT TGGTCAGGCG
GCTTCGTGTG TCTGTGTGCT GTGGTTCTTT ACCATTACAA AAAACGTGCC GATGAGGTTG
CACGTGCGTG AGCTCGTATT TCAAGCACGC ACCGTGGGAA CTATTCTGGC GTTGGGATTT
GCAAGTTTTG CGCTGCAAGC GGCTGCGGCA ATTGTGAGCT TTGTACTAAA CAACATGCTC
GTTAAATACG GAGTGCAGAG TGCTATCGGT TCCGATGGAG CACTTGCCTC TATTGGCGTG
GTGCAGCGGG TTGCCCTGTT TACGGTGTTC CCTTTGATTG GTGTCGCAAT CGCTATACAG
CCGCTGCTTG GCTTCAATTA CGGCGCGCAT CTGTTTGCGC GTGTGCGTAC AACGGCAAAA
GATGGCATTC TAACCGCTAC CGCCATTTCG GTTTTCATGT GGGTGATTGT GCATGTGTTC
CCCAATCAGA TTGTGGGGGC ATTTGGTATT GTCGACGCAG ACCTGGTTTC ATTTACGGTG
TTCGCGCTGA AGATACAGCT GCTCATGCTA CCTTTTATTG GATTTCAAAT TATTGGATCC
AATTATTTCC AAGCGACAGG ACAGCCGTTT AAATCATCAT TCCTTTCCTT GTCGCGCCAG
GTTCTCTTTT TGATTCCGTT ATATCTGGTG TTTCCAGAAG TGCTGCCACA GATAGCACCG
CAGTTAACGA GTCTCGATGC CCTTTACTGT GCAGTTCCCG TTGCTGATTT TCTGTCTATT
TTTACCACGG CGCTGTTCTT TTTTGTGGAA TCAAAGCGAA TCAAGCGGCT TGAAGCAGGC
AAGGCGGTCG CGCGCTTTTA A
 
Protein sequence
MGTESIPRLI AEFSIPSIIG MLANGAYNVI DSVFLGQAMG EIGLSAVTAA TPVMIIFLAI 
ALLVGNGGNA LAALRLGQGD RLGAERALGN TVSLSVVFSL AVALIAFMPP SIETLLTLSG
ATVETWDAAR IFIQILSAGF ILQCIGMGVN NFIRTAGAPN RALGTMVIGA VVCIVFNYLF
VIVCNLGVVG SACATLVGQA ASCVCVLWFF TITKNVPMRL HVRELVFQAR TVGTILALGF
ASFALQAAAA IVSFVLNNML VKYGVQSAIG SDGALASIGV VQRVALFTVF PLIGVAIAIQ
PLLGFNYGAH LFARVRTTAK DGILTATAIS VFMWVIVHVF PNQIVGAFGI VDADLVSFTV
FALKIQLLML PFIGFQIIGS NYFQATGQPF KSSFLSLSRQ VLFLIPLYLV FPEVLPQIAP
QLTSLDALYC AVPVADFLSI FTTALFFFVE SKRIKRLEAG KAVARF