Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_02200 |
Symbol | |
ID | 8374428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | + |
Start bp | 268591 |
End bp | 269991 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644993143 |
Product | Na+-driven multidrug efflux pump |
Protein accession | YP_003150633 |
Protein GI | 256826674 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 128 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTACTG AGTCGATTCC CCGTTTGATT GCAGAGTTTT CCATTCCTTC GATTATTGGC ATGCTTGCGA ATGGTGCCTA TAACGTTATC GATTCGGTGT TCTTGGGCCA AGCGATGGGT GAGATCGGTC TGTCGGCCGT GACAGCGGCG ACGCCGGTCA TGATTATTTT TCTTGCTATC GCTTTATTAG TGGGCAACGG TGGTAATGCA CTCGCTGCTC TGCGTTTGGG GCAAGGCGAT CGATTGGGAG CCGAACGGGC TCTTGGCAAT ACGGTGTCAC TTTCAGTGGT CTTTTCTCTC GCGGTTGCTT TGATAGCTTT TATGCCACCG TCAATCGAAA CACTGTTAAC GTTGTCGGGG GCAACGGTAG AAACATGGGA TGCGGCGCGT ATCTTTATTC AGATACTTTC GGCAGGCTTT ATTTTGCAGT GTATCGGCAT GGGGGTGAAT AACTTCATCC GTACTGCTGG TGCGCCAAAC CGCGCGCTTG GCACGATGGT TATTGGGGCA GTGGTTTGCA TTGTTTTCAA TTACCTGTTT GTTATCGTGT GCAATTTAGG CGTTGTGGGT AGTGCGTGCG CCACGCTGGT TGGTCAGGCG GCTTCGTGTG TCTGTGTGCT GTGGTTCTTT ACCATTACAA AAAACGTGCC GATGAGGTTG CACGTGCGTG AGCTCGTATT TCAAGCACGC ACCGTGGGAA CTATTCTGGC GTTGGGATTT GCAAGTTTTG CGCTGCAAGC GGCTGCGGCA ATTGTGAGCT TTGTACTAAA CAACATGCTC GTTAAATACG GAGTGCAGAG TGCTATCGGT TCCGATGGAG CACTTGCCTC TATTGGCGTG GTGCAGCGGG TTGCCCTGTT TACGGTGTTC CCTTTGATTG GTGTCGCAAT CGCTATACAG CCGCTGCTTG GCTTCAATTA CGGCGCGCAT CTGTTTGCGC GTGTGCGTAC AACGGCAAAA GATGGCATTC TAACCGCTAC CGCCATTTCG GTTTTCATGT GGGTGATTGT GCATGTGTTC CCCAATCAGA TTGTGGGGGC ATTTGGTATT GTCGACGCAG ACCTGGTTTC ATTTACGGTG TTCGCGCTGA AGATACAGCT GCTCATGCTA CCTTTTATTG GATTTCAAAT TATTGGATCC AATTATTTCC AAGCGACAGG ACAGCCGTTT AAATCATCAT TCCTTTCCTT GTCGCGCCAG GTTCTCTTTT TGATTCCGTT ATATCTGGTG TTTCCAGAAG TGCTGCCACA GATAGCACCG CAGTTAACGA GTCTCGATGC CCTTTACTGT GCAGTTCCCG TTGCTGATTT TCTGTCTATT TTTACCACGG CGCTGTTCTT TTTTGTGGAA TCAAAGCGAA TCAAGCGGCT TGAAGCAGGC AAGGCGGTCG CGCGCTTTTA A
|
Protein sequence | MGTESIPRLI AEFSIPSIIG MLANGAYNVI DSVFLGQAMG EIGLSAVTAA TPVMIIFLAI ALLVGNGGNA LAALRLGQGD RLGAERALGN TVSLSVVFSL AVALIAFMPP SIETLLTLSG ATVETWDAAR IFIQILSAGF ILQCIGMGVN NFIRTAGAPN RALGTMVIGA VVCIVFNYLF VIVCNLGVVG SACATLVGQA ASCVCVLWFF TITKNVPMRL HVRELVFQAR TVGTILALGF ASFALQAAAA IVSFVLNNML VKYGVQSAIG SDGALASIGV VQRVALFTVF PLIGVAIAIQ PLLGFNYGAH LFARVRTTAK DGILTATAIS VFMWVIVHVF PNQIVGAFGI VDADLVSFTV FALKIQLLML PFIGFQIIGS NYFQATGQPF KSSFLSLSRQ VLFLIPLYLV FPEVLPQIAP QLTSLDALYC AVPVADFLSI FTTALFFFVE SKRIKRLEAG KAVARF
|
| |