Gene Ccur_01070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_01070 
Symbol 
ID8374315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp133100 
End bp136723 
Gene Length3624 bp 
Protein Length1207 aa 
Translation table11 
GC content51% 
IMG OID644993031 
ProductABC-type antimicrobial peptide transport system, ATPase component 
Protein accessionYP_003150522 
Protein GI256826563 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones154 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGAGC TTAGAGAACT GCGTAAATCG TATAAAACGG GCGACTTCGT GCAGAAGGCT 
CTCGACGGTG TATCGCTCAA TCTTCGCAAC AATGAATTTG TTGCCGTGTT GGGTGCTAGT
GGATCGGGTA AAACGACACT GCTCAATATT TTGGGTGGGC TTGATCATGC CGATTCGGGC
GATATTGTTA TTAATGGAAC CTCAACAAAA AACTACCGAG CGAAAGACTG GGATGCCTAT
CGCAATCACC GTATCGGTTT TATCTTTCAG AGTTACAACC TTATTCCGCA TCAAAGCATT
CTGTCGAACG TGGAACTTGC TCTGACGCTG GCCGGTGTGT CGCGCGCCGA GCGCCGTCGT
CGTGCAACTG AAGCGCTAAA GCAGGTTGGT CTTGGCGATC ATCTGCACAA ACGTCCTAAT
CAGCTATCTG GTGGCCAGAT GCAGCGCGTT GCCATTGCGC GTGCTCTTGT AAACGATCCT
AATATCGTTC TTGCTGACGA GCCAACGGGC GCGCTTGATA CCGAAACAGG CATTCAGGTT
ATGAATATCC TGAAGGATGT GGCATCTGAC CGGCTTGTTA TCATGGTTAC GCACAACCCC
GAATTGGCAG AAGAATATGC CACACGCATC GTGCGACTAA CCGATGGCCG CATTGCGGGA
GACAGCAATC CCTTTGTTCC ACCAGTTGCT TCTGCGCTGC CCCGCGCTGC ACAGGCAGCC
ACCGGCGCAG CAGCCGTACG TGCTGCCGCT GTGGACGCTG CCGAGGCTGC TGAAACCATG
TCCGCTGAAT CCGTCGAAGA TAATGCAGGT GAAGTAACCA GTGCGACTTC CGATCAAGCA
GGTGCTCCTA AAGATAAAAT GTCTGCATTC GTGCCAGTAG CAGGTACGGC CTGGTCAACT
GGTGTTTCCG CGGCTGGGTC GAGTGCTGCG ACATCGGCTG GTGCGGGTGC CGGGTCGGGC
ATTGGATCAG ACCGCAAACG TAACGCGGGT AAGGCCTCGA TGTCGTTTTT GACGGCGTTG
GCCCTTTCCT TCAACAACCT TATGACCAAA AAGGGCCGTA CGTTCTTAAC GGCCTTTGCC
GGGTCGATCG GCATTATTGG TATTGCCTCA ATTCTTTCGC TTTCCAATGG CGTGAACAAC
TACATAGCGG ATACCGAAGA AAAAGCGCTG ATGAGCTATC CGCTTTCTAT TACGAAGTCG
AGTTTTGACA TAGCAGGACT CATGACAGTC ACGATGGGCT ATTCCACGTC AAGTAGCGAC
GATGTTGCAT CGGAGCAGAC CAATGGGGAT GCAACAGCTG TATCAACATC CACCAAGATC
CCTGAAGAAA AAATCATGTC CGATATGTTC GCCAAGGTGA AAACAAACAA CCTGCGCGCG
TTTAAGAACT TTCTCGATAA CGGTGATTCT GGCATTGATC AGTATCTCAA CGCGATTCAG
TACAACTACA GCATTACGCC GCAGGTGTAT CTTCCTAACA CCGAAAATGA CGAAATCAAA
CGGATCAATC CCTCTGAAAT GGGCGGTATG TTCTCTAATG GACTAACCGG ATCAGCCCTT
TCAGTTTCAT CATCGGGCAT GAACTCGTTT TATGAATTGT CAGATTCTTC AGCGGTGCGT
GATACCCAAA TGGAATTGCT TGAAGGTCAC TGGCCGGAGA GTGCGAATGA AGCGGTGCTT
GTACTCAGTG GGGCAGGGCA GATTAGCGAT TACACACTCT ATAGCCTTGG TGTGTACGAT
CCCGAAGAAA TGACCAAGAT GGCCAAGGAT GCGCTTGCTG GTAACGAAGT GACGGTTCCC
GAAACATCTG GCGACTTTAC GTATGAAGAT GCACTCAATC TGTCATTCAA AATTGTGCCT
TTAAGCAGCA TGTATCAGTA CAACGATGAA TCGGGTACGT GGACCGATAT GTCGAAGGAC
GACGATTACA TGAAGCAGCG CATCGACGAG GGAATTGATT TGCGCATCGT TGGTGTCGTA
AAGAAGGCAG AAGGCGCAAG CGGTTCATCA GCAACCGAAG GCGTGGCGTA TACCTCGGCC
CTCACGCGTG AACTGATGAA TAAAGCGGCT GAATCCGACA TCGTCAAACA GCAGATCGAT
AACCCCGATA CTGATGTGTT TACCGGTAAG ACGTTTGACG AATTAAAAGA TAGTCAAAAA
GAAGAGTTCG ACTTAAGTTC GGTATTCTCG GTTGATGAAG AAGCTCTTCA AAAGGCGTTC
TCCTTCGATT CGAGCGCCTT ATCGCAGATG GGTTCTGGGT TTGACCCGAG TGCGCTGTCG
TTTGATGGAA GCAGTCTTGC TTTTGATCCG TCTTCGCTTC AACTCGACTC TAGCGCCATT
TCAGAGATCT TCAACGAAGA TTCTATGCGT GAAATTATGG CGAATGCCCC TCGTTTCAAT
CTTGATTCAT CAAGTGCCGG GTCGATAACG GATGGTCTTT CTGCCGAACA GCGCCAGCAA
ATTGCTCAGG CATCCAACAG CCTAGCGGCA GGATTTCTTG CTTGGTATGT CACACCGCAG
GCTAATGGCG GCTACGGCGG GTCGCTGTCC GATCTCACGG GGTCATCGTC GAATTTCGCG
GCTGCTTTCC AGCAATATCT TGCCACCGAT GGTGCGCGTG CGATTACCGA TCCGCTCATG
CAGGATCTGG GTGGCGATAT TCAGCAGCAG ATCAATGCCG CCATGCAGAA TTACATGACA
AACCAGTTTG CCCCGTATCT ATCGGAATCA CTGTCAGCCT TGATGCAACA GGCTGCTCAG
GTGATGGGGC TGCAAATGGC ACAGGCGCTT CAGACTCAAA TGGCCGCGCT TACCGGCACG
CTGGGTTCTC AGCTTTCACA GGCGATTTCT GGTCAGCTTT CCGGTCAGAT CAATCAGCTT
TCCGAAGCCA TGCAGAACGG GTTCTCGTTT GACCCTGAAG CATTCGCCGA TGCAATTCAC
TTCAATATGA CGCAGGACGA CCTTACCAGT TTGCTGACGA ACTACATGAA CACCGGTGAT
CTGACCTACG ACGGCAATAT GAAGAAACTC GGCTATGCTG AAGAGGCAAG TCCTTCATCG
ATCGATCTGT ATCCTGTCGA CTTCCCCGCG AAGGAAAAAG TGATTGGAAT CATTGGCGAT
TACAACACCG ATATGACGAA TGCCGGCGAG GACGATAAGG TCATTCAGTA TAGCGACTTG
GCTGGCGTGC TTATGAAGTC AGTTACCGAT ATCGTCAATA CCATCAGCCT CGTGCTGATT
GCCTTTGTGT CCATCTCGCT GGTCGTTTCA TCAATCATGA TCGCTATTAT TACGTATATT
TCGGTGCTTG AGCGGCGGAA GGAAATTGGC ATTCTGCGTG CTATGGGAGC TTCAAAGCGC
AACGTGGGTA GTGTCTTTAA TGCTGAAACA ATTATCGAGG GTCTTATAGC TGGTATATTT
GCTATTGCGG CAGTATGGCT GGCTTCGTTC CCCGTGAATG CTTTTGTTGA AGCGGGCTGG
AATGTGCCGA ACATCATGAG TCTTCCGTGG GAATCGGCGC TCATTCTTAT CGGGGTGAGT
GTGGCGTTGA CGTTTGTTGC GGGCCTTATT CCCTCGTCGA TGGCTTCACG CCGCGATCCG
GTTGAAGTGC TGCGCAGCGA ATAA
 
Protein sequence
MIELRELRKS YKTGDFVQKA LDGVSLNLRN NEFVAVLGAS GSGKTTLLNI LGGLDHADSG 
DIVINGTSTK NYRAKDWDAY RNHRIGFIFQ SYNLIPHQSI LSNVELALTL AGVSRAERRR
RATEALKQVG LGDHLHKRPN QLSGGQMQRV AIARALVNDP NIVLADEPTG ALDTETGIQV
MNILKDVASD RLVIMVTHNP ELAEEYATRI VRLTDGRIAG DSNPFVPPVA SALPRAAQAA
TGAAAVRAAA VDAAEAAETM SAESVEDNAG EVTSATSDQA GAPKDKMSAF VPVAGTAWST
GVSAAGSSAA TSAGAGAGSG IGSDRKRNAG KASMSFLTAL ALSFNNLMTK KGRTFLTAFA
GSIGIIGIAS ILSLSNGVNN YIADTEEKAL MSYPLSITKS SFDIAGLMTV TMGYSTSSSD
DVASEQTNGD ATAVSTSTKI PEEKIMSDMF AKVKTNNLRA FKNFLDNGDS GIDQYLNAIQ
YNYSITPQVY LPNTENDEIK RINPSEMGGM FSNGLTGSAL SVSSSGMNSF YELSDSSAVR
DTQMELLEGH WPESANEAVL VLSGAGQISD YTLYSLGVYD PEEMTKMAKD ALAGNEVTVP
ETSGDFTYED ALNLSFKIVP LSSMYQYNDE SGTWTDMSKD DDYMKQRIDE GIDLRIVGVV
KKAEGASGSS ATEGVAYTSA LTRELMNKAA ESDIVKQQID NPDTDVFTGK TFDELKDSQK
EEFDLSSVFS VDEEALQKAF SFDSSALSQM GSGFDPSALS FDGSSLAFDP SSLQLDSSAI
SEIFNEDSMR EIMANAPRFN LDSSSAGSIT DGLSAEQRQQ IAQASNSLAA GFLAWYVTPQ
ANGGYGGSLS DLTGSSSNFA AAFQQYLATD GARAITDPLM QDLGGDIQQQ INAAMQNYMT
NQFAPYLSES LSALMQQAAQ VMGLQMAQAL QTQMAALTGT LGSQLSQAIS GQLSGQINQL
SEAMQNGFSF DPEAFADAIH FNMTQDDLTS LLTNYMNTGD LTYDGNMKKL GYAEEASPSS
IDLYPVDFPA KEKVIGIIGD YNTDMTNAGE DDKVIQYSDL AGVLMKSVTD IVNTISLVLI
AFVSISLVVS SIMIAIITYI SVLERRKEIG ILRAMGASKR NVGSVFNAET IIEGLIAGIF
AIAAVWLASF PVNAFVEAGW NVPNIMSLPW ESALILIGVS VALTFVAGLI PSSMASRRDP
VEVLRSE