| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_00920 |
|---|
| Symbol | |
|---|
| ID | 8374300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | + |
|---|
| Start bp | 114034 |
|---|
| End bp | 116247 |
|---|
| Gene Length | 2214 bp |
|---|
| Protein Length | 737 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644993016 |
|---|
| Product | formate dehydrogenase alpha subunit |
|---|
| Protein accession | YP_003150507 |
|---|
| Protein GI | 256826548 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 139 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCGAC ATATGGCTGT CTGTCCGTAC TGCGGTGCGG GCTGCAAGCT GGATCTTCTC
GTTGATGACA ATGGTAAAGT TGTCGGTGCT GAGGGCCTTG ATGGTGTTAC AAACCAGGGA
GAATTATGCC TCAAGGGCCT GCACGGCTAC GATTTCATCA ACGATACAAA GATCCTGACG
CCGCGTATCT ATCACCCCAT GATTCGCCGT ACAAAGGGAG CACCCCTCGA GCGTGTCAGC
TGGGATGAGG CACTTGATTT TACAGCGAAG AAGCTTACTG AAATCAAAGA AAAGTATGGT
CCCGATTCGA TCATGTTGAC AGGATCATCG CGTGGACCAG GCAACGAAGC AAACTTCGTT
ATGCAGAAGT TTACTCGTGC TTGCATTGGA ACAAACAATA TCGATAACTG CGCTCGAACT
TGACACGGTC CTACAGTCAT CGGTCTGATG GACACAGTTG GCTCAGGTTG CATGAGCGTT
AGCATTCCGG GCATGGAAGA TGCCGAATGC ATTATGTTAT TTGGTTACAA TCCAAGTGCT
TCGCACCCCA TCGTGTCACG CCGCATTGTG CGTGCCAAAG AAAAGGGTGC CAAGATCATT
GTCGTCGATC CGCGCGTTAT TGAAACAGCA CGTATCGCTG ACATCCATCT GCAGATTAAT
AATGGCTGCA ATATTGCCTT CCTCAATGCA TTTGCTAATG CTATTGTTAC GGAAAATCTG
CATGACAAAC AATTCATCGA AGAGCATACG AATGGCTTCG ATGAGTGGTG GGAAACCATC
AAAAACTACA CTCCCGAATC AGTTGAACAC ATCACGGGTG TTGACCCTGA ACTGATGCGT
CGTGCGGCAC GTATGTATGC AACTGCCAAG ACTTCCATTC TTGGGTGGGG CATGGGCGTT
GCTCAGCAGA AGCAAAACGT TCCTACAGTT CATACGCTGG CTGCAATCGC TTGTATCTCG
CATCAAATTG GCAAGCCGAA TGCTGGCTTA GCTCCGGTGC GTGGTCAGAA CAACGTGCAG
GGTTCCTGCG ATATGGGTAT GTTGCCTAAC TTGTATCCCG GTTATCAAAA GGCTACCGAT
ATCAAGGTTC GCGAAAAGTT TGCTAAGGCT TGGAATGTTC CGCTTGAACG TTTGTCCGAT
CACGATGGTT ACAAGCTAAC CGACGTGGGC CACAATGTGG ATGAGGGTAA GGTTCATGCG
TTCTACAACT TCGGTGAGGA CCCCTTGCAG ACTGAACCCG ATGCGATTGA TCTGAAGCGT
CAGCTTCAAG ACCTCGATCT GTTTATTTGC CAGGACATCT TCATGACGCA GACCACCATG
CTGGCTGACG TTATCTTCCC GGGTACTAGC TGGGGCGAAC ATGATGGCGT CTTTACTGCT
TCTGACCGTA CCTTCCAGCG CTTTACTGCG GCGGTACCTC CAAAGGGAGA ATGTCGTCAC
GACTGGCAAA TCTTCCAGGA TCTTTCCACG CGTATGGGCT ATCCCATGCA CTACAACGAC
ACGAAGGAAA TCTGGGACGA AGTCCGCGAG CTCTGTCCGA CCTTCTACGG GGCAACATAT
GAAAAGATGG CGGGTGTGGG TCATGCTCAG TGGCCTATTC GCAACATCGA AGACGAAGGC
ACGCGCGATA TGTTCCTTGG TGGTCAGTTC ACAACGCCTG ATCACAAGGC TGTCTTAATG
GCTCACGATT GGGAGCCACC AACCGAGCTG CCTGACGATG AGTATCCACT CATTCTGTGC
ACCGTTCGCG AAGTGGGTCA CTATTCTTGT CGTTCTATGA CTGGCAACTG CCGCACGCTT
GCAGTGCTTG CTGACGAGCC TGGTGAGATT CACATTCATC CTGATGATGC GGCAGCCCGC
GGTATCAATG ATGGTGAACT CGTTCGTGCG CATTCGCGCC GTGGCGAAGC AATGACTCGC
GCCGTGGTTG ATCCTCGTAT CAACAAAGGT ACCGTTTACA TGACCTACCA GTGGTGGATT
GGCAAGTGCA ACAACTTAAC GTTACATGCA GTCGACCCTC GTTCTCATAC ACCTGAAGAT
AAATTTAGTG CGTGCCAGGT CGATGCGATA GAAGACCAGG TTTGGGCAGA ACAGCGCTTA
CAGGAAATGT ATGACCAGCT GAAGGAAGAC CTTGTAGAGA CGGCCTCTGC GCAGGATATG
GAACCTGGCC AAGAGGCGAA ACTTTCTCGT CAGACGGCTA ACGCCATAGT CTAG
|
|---|
| Protein sequence | MERHMAVCPY CGAGCKLDLL VDDNGKVVGA EGLDGVTNQG ELCLKGLHGY DFINDTKILT
PRIYHPMIRR TKGAPLERVS WDEALDFTAK KLTEIKEKYG PDSIMLTGSS RGPGNEANFV
MQKFTRACIG TNNIDNCART UHGPTVIGLM DTVGSGCMSV SIPGMEDAEC IMLFGYNPSA
SHPIVSRRIV RAKEKGAKII VVDPRVIETA RIADIHLQIN NGCNIAFLNA FANAIVTENL
HDKQFIEEHT NGFDEWWETI KNYTPESVEH ITGVDPELMR RAARMYATAK TSILGWGMGV
AQQKQNVPTV HTLAAIACIS HQIGKPNAGL APVRGQNNVQ GSCDMGMLPN LYPGYQKATD
IKVREKFAKA WNVPLERLSD HDGYKLTDVG HNVDEGKVHA FYNFGEDPLQ TEPDAIDLKR
QLQDLDLFIC QDIFMTQTTM LADVIFPGTS WGEHDGVFTA SDRTFQRFTA AVPPKGECRH
DWQIFQDLST RMGYPMHYND TKEIWDEVRE LCPTFYGATY EKMAGVGHAQ WPIRNIEDEG
TRDMFLGGQF TTPDHKAVLM AHDWEPPTEL PDDEYPLILC TVREVGHYSC RSMTGNCRTL
AVLADEPGEI HIHPDDAAAR GINDGELVRA HSRRGEAMTR AVVDPRINKG TVYMTYQWWI
GKCNNLTLHA VDPRSHTPED KFSACQVDAI EDQVWAEQRL QEMYDQLKED LVETASAQDM
EPGQEAKLSR QTANAIV
|
|---|
| |