Gene Ccel_3457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_3457 
Symbol 
ID7312016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp4022357 
End bp4023688 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content32% 
IMG OID643610366 
Productsignal transduction histidine kinase regulating citrate/malate metabolism 
Protein accessionYP_002507725 
Protein GI220930816 
COG category[T] Signal transduction mechanisms 
COG ID[COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCATATAA AGTTTTTTTT ACTGTTATTG ACTGTTATTG AAGGTTTTAT TTTTATAATG 
GCTTTTTATT TTCTATCAGG CCAGCGTAAA TTCATAAAAA ATAATTATAT TCGGATTGCC
TGCTTTGTAT CTATTTATAC AATATATACA TACTGGATTA CCAAGTTTTT GCCGTCAGGG
CTGCATTCAA TTTTAATTGC ATCCCTTACA TGTTTTATAC TTAACTATAT ACTTAACGGA
ACTCTTTTAA AAAGTTTTGT CAAAGTTCTA ATTATTTTTT TGGGAATAGC TATTATTGAA
AGTCTCATCG GTCTGGCATG TACGACTATC ATAGGCAAGC CAATGTCAGT ATTGATTCAC
AATAATGAAG TACTGTTAGT TCTAGGTATT ATAGCAAAGC TGATTCAAAG CACTATTGTA
TTTATATTAT ACAATTCCCA CGATGGATTT TCCTGGTTAA AGGACGGAAA CCCCTATCAG
TCAAGATACA AGCAGACTCT TATAATGATT TTTGCAGTAC TGTTCTTTAT GATAGGAACA
AATATTTATA TTTCCAAAGA CCCCCAAAAT CTACTTCTTT ATAATATTTT TACCTTTGTT
ATATATATCG TTTTGATTAT TTCAATGCTT TCTGCCTTCA GGGAAGGTTC AAAGCTTGAG
ATTCTGCAAT ATGCAAATGA ACTTAAAAAA GAAAACGTTT TTCAGTTGAT TTCCTTTAAC
GAAATGGTGG CTAAAGAAAG GCACGAATAT AAAAACCATT TAAATACTAT ATACGGTCTT
TGTACCCTAA ACAGACCTGA CCTAAGTGAA AAGGTCAAGC AATATATAAA CAATTATGCC
AATAACAGCG AGACCAAGAA TATAAATGTA TGTTCTGGTA ACGACTTTGT TGACGCAATT
ATCAGCGTAA AATATAATAA CGCTTTAAAG AAAGATATAG AAGTTCTTGT GGACTTTGAA
GAACCTTTAT CAAGTGCAGT AATAGACGAA GACACTGCTG TTACTGTTTT ATCTAATATA
ATAGATAATG CTTATGAATC TATATTAGGA ATAGATAGGG AAAAAAAGTA TATACGTCTT
GAAACATATA TCGATAATGA TATTTACTAT ATGTCTATTT CCAACAACGG CCCCATGATT
CCCGAAGCAA TTATTAAGAA AATTTTCAGT GCAGGTTATT CCACTAAAGA AAATTCATCC
AAAAAAAGAG GCTTCGGCCT GAGTATAGTT CAATCACAGA TAGAAAAGTG CGGGGGCAGC
ATCCATATTA ACAGCAACGA AGAAATTACA GAATTTCTCA TAACACTTAT AGTGAATAAT
CAGGTAAGCT GA
 
Protein sequence
MHIKFFLLLL TVIEGFIFIM AFYFLSGQRK FIKNNYIRIA CFVSIYTIYT YWITKFLPSG 
LHSILIASLT CFILNYILNG TLLKSFVKVL IIFLGIAIIE SLIGLACTTI IGKPMSVLIH
NNEVLLVLGI IAKLIQSTIV FILYNSHDGF SWLKDGNPYQ SRYKQTLIMI FAVLFFMIGT
NIYISKDPQN LLLYNIFTFV IYIVLIISML SAFREGSKLE ILQYANELKK ENVFQLISFN
EMVAKERHEY KNHLNTIYGL CTLNRPDLSE KVKQYINNYA NNSETKNINV CSGNDFVDAI
ISVKYNNALK KDIEVLVDFE EPLSSAVIDE DTAVTVLSNI IDNAYESILG IDREKKYIRL
ETYIDNDIYY MSISNNGPMI PEAIIKKIFS AGYSTKENSS KKRGFGLSIV QSQIEKCGGS
IHINSNEEIT EFLITLIVNN QVS