Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_3255 |
Symbol | |
ID | 7312468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 3809284 |
End bp | 3810531 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643610156 |
Product | Orn/DAP/Arg decarboxylase 2 |
Protein accession | YP_002507524 |
Protein GI | 220930615 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATGATA GGCAAATAAT TAATATTGCA CATAAATATA AAACTCCACT GTACCTTTTT GATGGAGATA GGCTGGAAGA GACTTATTTC AACATGAAAA AAGTGTTGCC GGATGCCTTT GAATTTTTCT ATTCGGTAAA AGCTAATCCT TCGTATGGCA TATGTAGAAT CTTACAGAAG TGTTCTAGTG GGATAGAAGT AGCTTCAGCG GGTGAACTTC ATTTGGCTCT GGAGGCCGGA TTCGATAACA AAAAAATTCT TTTTACCGGG CCAGGTAAAA CGTACAGTGA ACTAGAATTT GCAGTAGATA GTAAAATACT GGCCATCAAT GCAGAATCCT ACAAGGAGAT TATGTTAATT GATGATATTG CTAAAGCGAA AAACAAGATT GTTGATGTAG GTTTACGGAT ACATCCAAAC TTTAAAATTG AATCTAAAAA CCCTGCAATC TCCATGATGG GTACAGGAAC TCAATTTGGT GTAGATATTG ATGAGATTCC CGAAATACTC AAATATATTA AGTCCTCAAA AAATCTCAAT CTTGTATGCT TTCATGTATA TGCAGGGTCC CAGATATTTC AGCCGGATAC GACACTTGCC TATTTTGAAC AGACAATAAA CATATTTAAA GAATTAATTG AAAAAAATGA TTTACATATC AAAGTACTGG ATTTCGGAGG TGGATTTGGG GTTTCTTACG ATGGGAAGAA TAAACCTTAC GATTTTGAGT ATTTTGGAGC AGAAATAAAT AAATTGTATC ACAAATATGA AGACTTTTTT CAGGGCAAGA AACTTGTTTT CGAGTCAGGA AGGTTATTAC TTGCCGAAAG CGGGGTATTT TTAACCGAGG TACAATACAG AAAAGTACTT CATGACAAGG TATTCTTGAT AACTGACGGC GGTATGAACC ATAATTCACT TTCAACCTTC CGAGAAAAGA AAATTCGAGG CAATTTCTTA ATGAAAATAT TGGATAACAG AAATGAAGAA GAGACGGTAA CTGTGGCTGG CCCACTTTGT ACCCCTGAAG ACATACTAGG TAGAAATGTA ACCTTAAATA AGGCGGATAG AGGGGATATT CTCTGTATTA AAAACACAGG GGCATATGGA AGCTCATTTA GTCCGTTAGG CTTTTTGGGG CATCCTGCAC CCTGTGAAGT ACTTATTTAC AAAAACAATG AGTATTATTT AAAAAAGCAT GGCGTATTTA AAAATATTCT AAATGGTCAA GAGATAATTG AATTATAA
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Protein sequence | MDDRQIINIA HKYKTPLYLF DGDRLEETYF NMKKVLPDAF EFFYSVKANP SYGICRILQK CSSGIEVASA GELHLALEAG FDNKKILFTG PGKTYSELEF AVDSKILAIN AESYKEIMLI DDIAKAKNKI VDVGLRIHPN FKIESKNPAI SMMGTGTQFG VDIDEIPEIL KYIKSSKNLN LVCFHVYAGS QIFQPDTTLA YFEQTINIFK ELIEKNDLHI KVLDFGGGFG VSYDGKNKPY DFEYFGAEIN KLYHKYEDFF QGKKLVFESG RLLLAESGVF LTEVQYRKVL HDKVFLITDG GMNHNSLSTF REKKIRGNFL MKILDNRNEE ETVTVAGPLC TPEDILGRNV TLNKADRGDI LCIKNTGAYG SSFSPLGFLG HPAPCEVLIY KNNEYYLKKH GVFKNILNGQ EIIEL
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