Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2893 |
Symbol | |
ID | 7311507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 3450821 |
End bp | 3452584 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643609788 |
Product | chitinase II |
Protein accession | YP_002507167 |
Protein GI | 220930258 |
COG category | [R] General function prediction only |
COG ID | [COG3858] Predicted glycosyl hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000583173 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAC ATAAAACACT TATTTGCATG ATACTTATAA CGGCCATGGC TTTTGGGATT GTTTCTCCGA TTGCACCGGA GGTACAGGCA GTAACTAAAA ACAAGCTTGA ACTTCATGCT TTTTACCCTG CTCAGGCTAC TTTCTCGGAT AGTTTAAAAA AATACATAGA TTCACTGGAC TCTGTCAGCT TCCTATGGGG CAGGATTTAC AGTGACCTGA CAGACGGTAT AAATACTACA TACGGTAAAA ATGGAAATAC TGATTTTTAT TATCCCTCTG ATTATATTGA GGTTCTTAAA TATGCAAAAA GCAAGAACAA GTCAATTCAA TTTGGGATTT TCTCAGATAG TTCAAATGCC GAAAAAATTC TTCCTTACAA GGAACAGAGA GAGAAAGCCA TTAAGTCTAT AACAGATCTT CTAAAAAGTG ATGTATCACA TGGTAATAAT ATTTATTTTG ACGGGGTTGT TATTGACATA GAAGGACTCA ACGGACAGAA AACAGCAAGC TTTTTTAACC AGTTTCTGAA AGAACTAAAA CCCAAACTGG CGGAAATAAA TAAAAAACTG TATGTGGCAG TAAATCCTTT ACGGTATTAT TCTGGCTACG ATTATTCATC CATCTCCCAG ACGGCTGATA AAATGATAAT AATGGCACAT GATTATGAGC CATTGACAAA GCTAACTAAA GAACAGGTGA TGCAGTATAC CGGATATGAT AGCCTGAACC CTATAGACAG TCTTGCCCCT ATTAAGGAAA TTCAGCATGT AATGGAGGAC GTAAAAAAAT ACGTTAGTAA AAACAATTTG AATAAAATAA TGCTTCAGAT AAGCTTTGAT GCTGCACAGT GGAGATTTTC GGTGGCAAAG GGTTCTACCT GGGGCAAGGC AGGGAAAAAG GCTGTAAGCT TGGAGGTACG TGATACTCCT ACGTATAAGA TGCTGTATGA CAGAGTTATA AATAAGGACG GTAATGGTAA ATTAATTACA TATAGCTATA ATAATGAACT CCAAAGTCCT GTTATGCAAT ATTTCAATAT AAACAATAGT ACCCAAAACA TTTGTCTTTA CGAAAACAGC AGAAGTGTAA AGGCTAAAAT AGATATTTCA AAACAGTACG GCATAGGCGG AGTATCTCTG TGGAGCCTTT CAAATGTTCC TGATTATACT GACAAAACTG CAAAGATATA TGGTCTTGAT GTTTGGGATA CAATAGTTAA ATCACTGCTT TTTGAAGCCC CAACTTCACA AACCAAAGTA ACCTTTGCCG ACAAGGTCGT TGAAAAGGCT GTAAGAACCA AACTATTCAA GCCTTCGGGA ACATTATACA AGTCAGATTT GGCAAAGGTG TACAGATTAA AAATTCCCGC AGGGTACAAG ACATTAAATG ATTTAAAGCA GCTTACGAAT CTGGAGTACC TGGATTTAAG CAACACAAAG CTTACAAGCG TGTCTGCATT GGCCTCATTA AAAAACCTGA GAGTGCTTTA TCTATATAAA AACGGTATAA AAGATATTTC TCCGATTAAA GGTTTAACAA AGTTGCAAGT TTTGTCAATT AACGGAAACA AGGTTTCCAA TATCAGTGCT TTAGCAGGTT TGACACAGCT TACGGAACTA TATATCAGGG AAAATACCAT AAATGATTTT TCACCTGTTG CAAAGCTAAA ACAATTAAAT ATTTTGTATC TTAAAGGCAA TAAGTCCACA AACTATAGTA AGCTTCAAAC AATAAAAAAA GGTCTTATTG AATGTGATTT TTAG
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Protein sequence | MKIHKTLICM ILITAMAFGI VSPIAPEVQA VTKNKLELHA FYPAQATFSD SLKKYIDSLD SVSFLWGRIY SDLTDGINTT YGKNGNTDFY YPSDYIEVLK YAKSKNKSIQ FGIFSDSSNA EKILPYKEQR EKAIKSITDL LKSDVSHGNN IYFDGVVIDI EGLNGQKTAS FFNQFLKELK PKLAEINKKL YVAVNPLRYY SGYDYSSISQ TADKMIIMAH DYEPLTKLTK EQVMQYTGYD SLNPIDSLAP IKEIQHVMED VKKYVSKNNL NKIMLQISFD AAQWRFSVAK GSTWGKAGKK AVSLEVRDTP TYKMLYDRVI NKDGNGKLIT YSYNNELQSP VMQYFNINNS TQNICLYENS RSVKAKIDIS KQYGIGGVSL WSLSNVPDYT DKTAKIYGLD VWDTIVKSLL FEAPTSQTKV TFADKVVEKA VRTKLFKPSG TLYKSDLAKV YRLKIPAGYK TLNDLKQLTN LEYLDLSNTK LTSVSALASL KNLRVLYLYK NGIKDISPIK GLTKLQVLSI NGNKVSNISA LAGLTQLTEL YIRENTINDF SPVAKLKQLN ILYLKGNKST NYSKLQTIKK GLIECDF
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