| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2567 |
|---|
| Symbol | |
|---|
| ID | 7312381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 3088542 |
|---|
| End bp | 3089612 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643609496 |
|---|
| Product | tartrate dehydrogenase |
|---|
| Protein accession | YP_002506875 |
|---|
| Protein GI | 220929966 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase
[TIGR02089] tartrate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.25872 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAC ACAAGATTGC AGTAATTGCG GGAGATGGAA TAGGTCCCGA AGTAATTGCT
GAAGGAGTAA AAGTGTTAAA GGCAATATCT GAATTGAATC CGGAAATTAA TTTTGAGTTC
ACCGAATTTC CATGGGGATG CGAGTATTAT GTCAAGACCG GAAAAATGAT TGCCGATGAT
GGTATGGAAC AACTCAAGAA ATTTGATGCA ATTTATCTCG GTGCTGTAGG ATACCCGGGT
GTACCCGACC ACATATCGCT TTGGGGTCTT TTGCTTAAAA TCAGAAAAGG ATTTGACCAG
TATGTAAATC TGCGTCCCGT AAGGCTTCTT GAGGGTGCTG AATGTCCATT AAAGGGAGTG
GACCGCAGCC AGATTGACAT GATAGTAGTA AGAGAAAACA GTGAGGGCGA ATATGCAGGT
GCAGGTGACT GGCTGTTCAA GGACAAGCCA GAGGAAGTAG TTTTGCAAAC AGGAGTATTT
TCACGCAAAG GCTGTGAACG TATTATAAGA TACGCATATG AGGTAGCAAG AAAAGAGGGA
AAAACCCTTA CAAGCATCAG CAAGGCAAAC GCCCTCAATT ATTCTATGGT ATTCTGGGAT
CAGATATTTG AGGAAGTTGG AAAAGAATAT CCTGATGTAA AAACATATTC ATATCTTGTG
GATGCAGCAT GTATGTTCTT TGTAAAGCAG CCTGAAAGAT TCCAGGTTGT AGTTACATCA
AACCTCTTCG GTGATATAGT TACGGATTTA GGTGCTGCCA TCTCAGGAGG TATGGGACTT
GCAGCAGGTG CAAATATAAA TCCTGAAAGA ACTTATCCGT CAATGTTTGA ACCTGTACAT
GGTTCAGCTC CTGATATTGC GGGACAGGGT AAGGCAAATC CACTGGCTGC AATATGGTCT
GTTAGCCAGA TGCTTGACTT CTTCGGTTAT GAGAATTGGG GAAGTAAAGT ATTAAATGCA
ATAGAGAAGG TAATGGTAGA AAGGAAGCAT CTAACTCCTG ATATGGGAGG AACATCTAAG
ACAAATGAAG TTGGAGATGC GGTAATTGAA GTACTCAAAA GATTAGCTTA G
|
|---|
| Protein sequence | MNTHKIAVIA GDGIGPEVIA EGVKVLKAIS ELNPEINFEF TEFPWGCEYY VKTGKMIADD
GMEQLKKFDA IYLGAVGYPG VPDHISLWGL LLKIRKGFDQ YVNLRPVRLL EGAECPLKGV
DRSQIDMIVV RENSEGEYAG AGDWLFKDKP EEVVLQTGVF SRKGCERIIR YAYEVARKEG
KTLTSISKAN ALNYSMVFWD QIFEEVGKEY PDVKTYSYLV DAACMFFVKQ PERFQVVVTS
NLFGDIVTDL GAAISGGMGL AAGANINPER TYPSMFEPVH GSAPDIAGQG KANPLAAIWS
VSQMLDFFGY ENWGSKVLNA IEKVMVERKH LTPDMGGTSK TNEVGDAVIE VLKRLA
|
|---|
| |