Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2413 |
Symbol | |
ID | 7311078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2907017 |
End bp | 2908072 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643609335 |
Product | twitching motility protein |
Protein accession | YP_002506723 |
Protein GI | 220929814 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTCAT TAGAGGATTT GCTAAAAAAA ACTTTGGAAT TTGGTGCTTC TGACTTACAT TTAACAGTAG GGATTCCCCC AACTATCAGA AAGAACGGCA GACTTTCTAC CATAGGTGAG GAAAAACTCA TGCCCTCGGA TACTGAAACG TTTGTCAGAA GTATGCTCAA TGAAGAACAG TGGAGGAAAT ATCAGGATAC AGGAGAACTT GATCTTTCAT TTGCACTTAA AGGTATGGGA AGATTCAGAG TTAATGTTTA CAAGCAAAGA GGTACCTGCT GTGCTGCTAT AAGAATGGTA AACCTTGTTA TTCCTTCAAT TGAGGAACTT GGATTGCCAA ATATAATTAT GGATATGAGC AGGAAAACCA AGGGAATGAT TTTAGTTACC GGCCCTACCG GAAGTGGAAA GTCAACGACT CTGGCTTTGC TTATTGATTT GATAAACAAA AATAGGGACT GCCATATACT TACTTTGGAG GATCCCATAG AGTATCTTCA CAAACACAAT AAATCCATTG TTAATCAAAG AGAAATAGGA AATGATTCGC AATCCTATTC TGCTGCACTT AGAGCGGCTT TAAGAGAAGA CCCTGATGTT ATTCTGGTGG GAGAGATGCG AGATACCGAA ACTATAGCTA TAGCTGTTAC TGCTGCCGAA ACAGGACACT TGGTTCTGTC TACTCTGCAT ACTATCGGAG CGGCTAATAC AATTGACAGA ATAATAGATG TTTTCCCCCC ATACCAGCAG CAGCAGATAA AAGTTCAGCT TTCTACGGTT ATTCAGTCTG TTATTTCGCA GCAGCTTCTT CCGAGAAAAG ATAAGCTCGG AAGAGTGCCC GCTATTGAAA TTATGGTAGC TACTCCTGCG GTAAGAAATT TAATCCGTGA GGGTAAAACA TATCAGATTA ATTCTCAGAT TCAGACAGGT GCAAAATTCG GAATGCAGGC AATGGACTCG AGTCTGGCAA GTTTGTATAA AAAAGGTATC ATAAGTCAGG AAGATGCAAT GACTTATGCC ATGGACCCAG ACAATATTAT CAGATACATG GGGTAA
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Protein sequence | MLSLEDLLKK TLEFGASDLH LTVGIPPTIR KNGRLSTIGE EKLMPSDTET FVRSMLNEEQ WRKYQDTGEL DLSFALKGMG RFRVNVYKQR GTCCAAIRMV NLVIPSIEEL GLPNIIMDMS RKTKGMILVT GPTGSGKSTT LALLIDLINK NRDCHILTLE DPIEYLHKHN KSIVNQREIG NDSQSYSAAL RAALREDPDV ILVGEMRDTE TIAIAVTAAE TGHLVLSTLH TIGAANTIDR IIDVFPPYQQ QQIKVQLSTV IQSVISQQLL PRKDKLGRVP AIEIMVATPA VRNLIREGKT YQINSQIQTG AKFGMQAMDS SLASLYKKGI ISQEDAMTYA MDPDNIIRYM G
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