| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2171 |
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| Symbol | |
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| ID | 7310863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 2540897 |
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| End bp | 2541634 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643609102 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002506493 |
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| Protein GI | 220929584 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000100732 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAACAGA AACAACGGTT GGACAAGGTT CTTTCAAATT TTGGGTTCGG TTCAAGAAAT
TATATAAAGG GTGCTGTTAA AAAAGGTCTT GTTACAGTAG ACGGGCGGAT TATTAAAGAC
AGCGGAATTC ATGTTGATCC TGAAGTAAGT ATCATTGAAA TAGACGGAGA AAGGCTGAAT
TACCGTAAGT ATATATACAT TATGCTGAAT AAGCCTCAGG GTGTTATTTC AGCTACAAGC
GACAGGAAGC AAAAAACAGT TTTTGATATT CTGCCGGAAG AATATAAATG CTTTGATCTA
TTTCCGGCAG GAAGATTGGA TATAGATACA GAAGGTCTGG TATTAATGAC AAATGACGGT
CAGCTTTCCC ATGAAATACT CTCCCCTAAA AAGCACGTTC CAAAGCAGTA TTATGCAAAA
GTGATGGGAA GGGTTAATCA AGAGGATGCA GAAGCTTTCA GCCGTGGCGT AACTCTTGAC
GATGGGTATC AGACACTCCC GGCGGTTCTG GAAATATTAA AATCAGATGA TTTATCAGAA
ATAAAGCTTA CAATTGTAGA GGGGAAATTC CATCAGGTAA AGAGAATGTT TGAGGCAGTA
GGTAAAAAGG TAATTTACCT TAAACGTCTT AGTATGGGAA ACCTTAGGTT GGACGAGAGC
TTACAGCTTG GGGAATGCAA GGAACTTGGA GAAAGTGACA TTGAACTGCT AAAGCAGGCA
ATAATTATTG ATAATTAA
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| Protein sequence | MKQKQRLDKV LSNFGFGSRN YIKGAVKKGL VTVDGRIIKD SGIHVDPEVS IIEIDGERLN
YRKYIYIMLN KPQGVISATS DRKQKTVFDI LPEEYKCFDL FPAGRLDIDT EGLVLMTNDG
QLSHEILSPK KHVPKQYYAK VMGRVNQEDA EAFSRGVTLD DGYQTLPAVL EILKSDDLSE
IKLTIVEGKF HQVKRMFEAV GKKVIYLKRL SMGNLRLDES LQLGECKELG ESDIELLKQA
IIIDN
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