| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2153 |
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| Symbol | |
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| ID | 7312329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 2522834 |
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| End bp | 2524486 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643609084 |
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| Product | YD repeat protein |
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| Protein accession | YP_002506475 |
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| Protein GI | 220929566 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0957707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATAC CTCGGAAGCG ATTGTATATA CAGGAGCCTG ACGGAAAATC CAATTATACT
GAATATTTTC AATATGGAGG TAAAAACAAA TATGGCGATA TAAAATCACA AACCGACCGT
AATGGAAATA AAACTCAGTA TGAGATTGAT GCTAGAGGCA ATGTAACCAA AATCACAAAT
CCTGACGGAA GTACCCAGCT AAAAGAATAC GATGAAAAAA ACAATGTAAC AAAAGAAGTG
GATGAGTGCG GGAAAACAAC CTACAATGTT TACGATGAAA ACAAAATAAA CCTGATAAAG
AAGGTACAAC CCCTTAACGA AACAGATGTA TACGACGGCA CAAACAATAC AGGTTTTGCA
ATAACTTTCT ACCAATATTA TACAGGAGAA GAATCGGGTT CATCTGCAAA GGGATTATTA
AAAAGTGAAA CAGACCCGGA GGGCAATACC ACCACGTACA CCTACAACAC TTATGGTGAT
GTAAAAGCAG TATCTGACCC AGAGACAGGC AAAGTTACAA CTTATGAGTA TAACCGCATA
GGCTGGAAAA CCGCACAAAT AACCCAAAAG GGCAACAGAA CAGAATTTAC CTACGACAAA
AACGGCCAGT TAATTAAAAC TACAACAGTA AGCTCAAAAA ATGAAACACA AAGAACGATA
TTTGACCTGT TGGGAAGAAA AATACAAGAA ATTACTCCAA ACCAATATGA CGATACAAAG
GATAATGTAG AAGCCGATAC ATATACTGAC AATACGGTGG GAACAAAATA CGAATACTTT
GATAGTGGTA AAATCAAGGA AGTAACCAAT GCATTAGGAG AAACGACAAG CTACACCTAC
GACGTATACG GGAACACGCT GACAGAAGCA AAACCCAACG GTGCAATTTA CAGGTATGAA
TATGATGTTC TGGACAGACT ACTTAAAATT TACTTCAGAG ATAATTCATC AGTAGCTGAA
GAACTACTTA CCCAATACAG TTATGCAACT TTGGAGGACG GAAAAACACA AACAACTGAA
ACAAAATATC TGAATTCCAA AGACAAGGCT GTAACGGTTT ACATATATGA CTATGCCGAC
AGGCTTGTAG AACAGCAGAA TCCTGACGCT ACAAAGCAGA GGACAATATA CAACGCAAAC
GGAACAATTA ACAGACAGAT TGCAGCTAAC GGAAGCAGTA CATACTTCAA ATATGATGGC
TTAAACAGAT TGACAGAACA ATGGGCCCCT TTTGAAGTAT CAAACGGAAA TACCCTGTAC
ACTTACAACA AAACCGAATA TGACAAGGCT GGAAGAAAAT CTGCGGTGAA ATCAGGCAAA
GACAAGGTAA CCCTGTGGTC AATACCTGAA AGCCTTGCAA TAACAAACTA CCAGTATTAC
AAAAACGGTA ACGTCAGCCA GACAAGGGAT TCTGAAGGAA GAAAGACAGA ATACCTGTAC
GATGATGACG GAAATGTTAT AAAAGAAAGT GTATATACCA ATGCAACCAA CAAGCTAGTA
ACGGATTATA CATACAATTA CCTTGGAAAG CTGGACAAAA AGGAGCAACA TGTAAAAACC
GGAGACCTGT ACGGAAAAGA CTTCAACGAC AAACGGACAC TTTACTTACA ACCTCCTACA
CTTATGACAA GAATGGTAAT ACAAAAACTG TGA
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| Protein sequence | MKIPRKRLYI QEPDGKSNYT EYFQYGGKNK YGDIKSQTDR NGNKTQYEID ARGNVTKITN
PDGSTQLKEY DEKNNVTKEV DECGKTTYNV YDENKINLIK KVQPLNETDV YDGTNNTGFA
ITFYQYYTGE ESGSSAKGLL KSETDPEGNT TTYTYNTYGD VKAVSDPETG KVTTYEYNRI
GWKTAQITQK GNRTEFTYDK NGQLIKTTTV SSKNETQRTI FDLLGRKIQE ITPNQYDDTK
DNVEADTYTD NTVGTKYEYF DSGKIKEVTN ALGETTSYTY DVYGNTLTEA KPNGAIYRYE
YDVLDRLLKI YFRDNSSVAE ELLTQYSYAT LEDGKTQTTE TKYLNSKDKA VTVYIYDYAD
RLVEQQNPDA TKQRTIYNAN GTINRQIAAN GSSTYFKYDG LNRLTEQWAP FEVSNGNTLY
TYNKTEYDKA GRKSAVKSGK DKVTLWSIPE SLAITNYQYY KNGNVSQTRD SEGRKTEYLY
DDDGNVIKES VYTNATNKLV TDYTYNYLGK LDKKEQHVKT GDLYGKDFND KRTLYLQPPT
LMTRMVIQKL
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