| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1969 |
|---|
| Symbol | |
|---|
| ID | 7310683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2328852 |
|---|
| End bp | 2330165 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643608903 |
|---|
| Product | germination protein, Ger(x)C family |
|---|
| Protein accession | YP_002506297 |
|---|
| Protein GI | 220929388 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02887] germination protein, Ger(x)C family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAAG TCTATAAGGT AATTATTTTG GCAATGGCAT TTATCTATAT TTTAACAGGT
TGTACGACAG ACAGTAAAAA TATAGATGAT CAGGCTTATG CAATAATGAT AGGAATCGAC
AAGGGAGTAG AGAACAAAAT AAGGTTGACC GTTCAGTTTC CCACATATAA GGGTGGGGGA
AGCAGCAGTT CTTCAGGAGG AGGCGGAGGA GGTGGTGGTG GTGGAAGTGA AGAAAAAGAA
TCCGGACAGG TTGACGGAAC AATTGTTACT ACAATAGAAT CCTCAACAGT GCTGGAAGCT
ATTAATATGC TAAATACTTC AACCTCCAGA CACATTTCCC TTGTACATTG CAAAGCTATA
ATTTTTTCGG AGAAATTAGC GTATGAGGGC ATAAACTTTT ACCTGTCCGA TTTTGCAAGA
TTCAGAGAAA CCAGACGTAT TGCAACGATA GGTGTTTGCA GGGGAAAAGC AGAAGACTTT
ATCATTGAGA ACAAAACGCT GATTGGTGAG AATATTTCAA AATCAATAGA GCTTGCATTT
TCTCAATCTC AAAATTCAGG ACTGTTCCCT ACTGTTTTTT TTACGAATTT TTACAAAAAC
ACCATATCAC CTTATTCACA GGCACATGCT CTTTATGTTG GTTTAAACAA TTTTAAAAAC
CTAAAGAATG AAAAGAATGG GGAAGAGCCT CCTCTTAAAA CCGAGGAAAA GTTTTATCCA
GGAGAAGTCC CCAAAAAAGG GAATCTAAGA CAAGAAATGA TTGGAACGGC CGTATTCAAT
GGAGACAAGC TTGCCGGCAC ACTGAATGCA GATGAAACAC GTTATTTTTT GATGGTAGAG
AATAAATTCA AACATGGAAT TTTGACCATT GAGGACAAGA TGAATCCGGG CAGGGCTATC
CCTTTTGATT TACGCCCGGG AAGAAAAACT GATATCAAGG TGGGGTTTGA CAAAAGCACA
CCCGTGATTG ATATAAATCT TAATATTGAA GCTGATATTG TAGGGATACA AAGCGGATTA
CACTATGAGA GTTTAGATAA AATACAGGAA CTTAACAAAT TATTACATGA TTCTATAGAA
GAAGGTGTAC GAAAAACTGT TCAAAAAGTT CAGAAGCAAA TGGGAACAGA TGTCTTTGGC
TTTGGCTATT ATGCCGCAGA CAAATTTATG ACAATAAATG ATTTTGAAAA ATATAACTGG
TTATCACATT TTATAGATGC CAAAATAAAT GTAAGTGTGT ATACCAATAT AAGAAGAACC
GGGCTAATGG CAGAAAGTAT GCCTGTAAGA TACCGGGACA AAATTGCAAA ATAG
|
|---|
| Protein sequence | MRKVYKVIIL AMAFIYILTG CTTDSKNIDD QAYAIMIGID KGVENKIRLT VQFPTYKGGG
SSSSSGGGGG GGGGGSEEKE SGQVDGTIVT TIESSTVLEA INMLNTSTSR HISLVHCKAI
IFSEKLAYEG INFYLSDFAR FRETRRIATI GVCRGKAEDF IIENKTLIGE NISKSIELAF
SQSQNSGLFP TVFFTNFYKN TISPYSQAHA LYVGLNNFKN LKNEKNGEEP PLKTEEKFYP
GEVPKKGNLR QEMIGTAVFN GDKLAGTLNA DETRYFLMVE NKFKHGILTI EDKMNPGRAI
PFDLRPGRKT DIKVGFDKST PVIDINLNIE ADIVGIQSGL HYESLDKIQE LNKLLHDSIE
EGVRKTVQKV QKQMGTDVFG FGYYAADKFM TINDFEKYNW LSHFIDAKIN VSVYTNIRRT
GLMAESMPVR YRDKIAK
|
|---|
| |