Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1612 |
Symbol | |
ID | 7310368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 1948857 |
End bp | 1950074 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643608541 |
Product | aminotransferase class-III |
Protein accession | YP_002505944 |
Protein GI | 220929035 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAAGTG ATTGTTATAT CAATTCCACA GAATTGATAA AGAAAGCAGA AAAGTCTTTA ATGTATGTTA CTAATCGTCC AGATGTTGTT TTTATAAAAG GTAAAGGTTC ATATCTATGG GATAGTAATT CCAACAAATA TCTAGATATG ATAGCTGGCT GGGCCGTGTG TTGCTTAGGG CACTCTCCAG AAATAATGGT TGATGCTTTA ACACGTCAAG CCAATTTACT AATAAACCCA AGCCCTTCTT TTTATAATGA ACCTGCAATA GAGTTTGCAA ATCTGCTTAC AAAAATCTCC TGTATGGATA AAGTTTTTTT TATTAATTCT GGGGCAGAAG CGAATGAGGG TGCTATAAAA CTAGCTAGAA AATATGGGCA AAAGTATATG AATGGAGCTT TTGAAATTAT TACCGCTTGG AATAGTTTTC ATGGAAGAAC ATTAGCTACA ATGGCGGCTT CTGGTAAAAA AATATGGGAG AACCTATACC AGCCCAGACC CCAAGGCTTC GCAAAGGTAG AATACAATGA TATTGAGTCA TTAAAACAAG CAATTTCTAA AGATACTTGT GCTATTATGC TTGAGCTTGT TCAAGGTGAG GGCGGTGTAA TAGCAGCAGA TAAGACTTAT ATTAAACAAG TAAGGCAACT TTGTGATGAA AATAACATTT TACTTATTAT AGATGAAGTA CAAACTGGAT TAGGCAGGTT AGGCCATATG TTTGCATATG AAGAATATGG AATTGAACCT GACATCATGA CACTTGCAAA AGGAATTGGA GGAGGTTTCC CACTTTCAGC TCTTCTTGCT AAGGATAAGG TGTGTTGTTT TGAAGCTGGA GATCAGGGCG GAACTTATAG TATGACACCT TTGGGTGCTG CCGTAGGTAA AGCAGTGGTT GAGGAGATTA TAAACTCTGA TTTGTGTAAT AACGCAAAAA AAATGGGTGA ATATTTTACT GAGCAGTTAT GTAAATTGAT GGATGAGCAT AAAGTCATCA AAGAAATTAG AGGAAGTGGA CTATTAATTG CAATAGGGTT ACATGAAGAA ATTGCTAATC AGATAAAAGA TGAATGTATG AATAATTTTT TGATTATTAA TGCTCCAAAT ACAAAAACGC TGAGGTTTAT GCCAGCTTTA AATATTTCAA CTGTTGAAGT TGATGAGGCT ATAAGTATTT TAAATAATGT TTTAAATAAA GTTTCTACAA TATCTTGA
|
Protein sequence | MSSDCYINST ELIKKAEKSL MYVTNRPDVV FIKGKGSYLW DSNSNKYLDM IAGWAVCCLG HSPEIMVDAL TRQANLLINP SPSFYNEPAI EFANLLTKIS CMDKVFFINS GAEANEGAIK LARKYGQKYM NGAFEIITAW NSFHGRTLAT MAASGKKIWE NLYQPRPQGF AKVEYNDIES LKQAISKDTC AIMLELVQGE GGVIAADKTY IKQVRQLCDE NNILLIIDEV QTGLGRLGHM FAYEEYGIEP DIMTLAKGIG GGFPLSALLA KDKVCCFEAG DQGGTYSMTP LGAAVGKAVV EEIINSDLCN NAKKMGEYFT EQLCKLMDEH KVIKEIRGSG LLIAIGLHEE IANQIKDECM NNFLIINAPN TKTLRFMPAL NISTVEVDEA ISILNNVLNK VSTIS
|
| |