Gene Ccel_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1612 
Symbol 
ID7310368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1948857 
End bp1950074 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content35% 
IMG OID643608541 
Productaminotransferase class-III 
Protein accessionYP_002505944 
Protein GI220929035 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR00707] acetylornithine and succinylornithine aminotransferases 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAGTG ATTGTTATAT CAATTCCACA GAATTGATAA AGAAAGCAGA AAAGTCTTTA 
ATGTATGTTA CTAATCGTCC AGATGTTGTT TTTATAAAAG GTAAAGGTTC ATATCTATGG
GATAGTAATT CCAACAAATA TCTAGATATG ATAGCTGGCT GGGCCGTGTG TTGCTTAGGG
CACTCTCCAG AAATAATGGT TGATGCTTTA ACACGTCAAG CCAATTTACT AATAAACCCA
AGCCCTTCTT TTTATAATGA ACCTGCAATA GAGTTTGCAA ATCTGCTTAC AAAAATCTCC
TGTATGGATA AAGTTTTTTT TATTAATTCT GGGGCAGAAG CGAATGAGGG TGCTATAAAA
CTAGCTAGAA AATATGGGCA AAAGTATATG AATGGAGCTT TTGAAATTAT TACCGCTTGG
AATAGTTTTC ATGGAAGAAC ATTAGCTACA ATGGCGGCTT CTGGTAAAAA AATATGGGAG
AACCTATACC AGCCCAGACC CCAAGGCTTC GCAAAGGTAG AATACAATGA TATTGAGTCA
TTAAAACAAG CAATTTCTAA AGATACTTGT GCTATTATGC TTGAGCTTGT TCAAGGTGAG
GGCGGTGTAA TAGCAGCAGA TAAGACTTAT ATTAAACAAG TAAGGCAACT TTGTGATGAA
AATAACATTT TACTTATTAT AGATGAAGTA CAAACTGGAT TAGGCAGGTT AGGCCATATG
TTTGCATATG AAGAATATGG AATTGAACCT GACATCATGA CACTTGCAAA AGGAATTGGA
GGAGGTTTCC CACTTTCAGC TCTTCTTGCT AAGGATAAGG TGTGTTGTTT TGAAGCTGGA
GATCAGGGCG GAACTTATAG TATGACACCT TTGGGTGCTG CCGTAGGTAA AGCAGTGGTT
GAGGAGATTA TAAACTCTGA TTTGTGTAAT AACGCAAAAA AAATGGGTGA ATATTTTACT
GAGCAGTTAT GTAAATTGAT GGATGAGCAT AAAGTCATCA AAGAAATTAG AGGAAGTGGA
CTATTAATTG CAATAGGGTT ACATGAAGAA ATTGCTAATC AGATAAAAGA TGAATGTATG
AATAATTTTT TGATTATTAA TGCTCCAAAT ACAAAAACGC TGAGGTTTAT GCCAGCTTTA
AATATTTCAA CTGTTGAAGT TGATGAGGCT ATAAGTATTT TAAATAATGT TTTAAATAAA
GTTTCTACAA TATCTTGA
 
Protein sequence
MSSDCYINST ELIKKAEKSL MYVTNRPDVV FIKGKGSYLW DSNSNKYLDM IAGWAVCCLG 
HSPEIMVDAL TRQANLLINP SPSFYNEPAI EFANLLTKIS CMDKVFFINS GAEANEGAIK
LARKYGQKYM NGAFEIITAW NSFHGRTLAT MAASGKKIWE NLYQPRPQGF AKVEYNDIES
LKQAISKDTC AIMLELVQGE GGVIAADKTY IKQVRQLCDE NNILLIIDEV QTGLGRLGHM
FAYEEYGIEP DIMTLAKGIG GGFPLSALLA KDKVCCFEAG DQGGTYSMTP LGAAVGKAVV
EEIINSDLCN NAKKMGEYFT EQLCKLMDEH KVIKEIRGSG LLIAIGLHEE IANQIKDECM
NNFLIINAPN TKTLRFMPAL NISTVEVDEA ISILNNVLNK VSTIS