Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1509 |
Symbol | |
ID | 7310273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1830624 |
End bp | 1831343 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643608433 |
Product | Rhs element Vgr protein |
Protein accession | YP_002505841 |
Protein GI | 220928932 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAG GAATCAATAT TTCTAATTTT ACTGAATATA TCCAAAGAGA TGAAAAAGTT TTAGGTGTCA TGATTGGAGT TGTCATAAAG AATGATTCCG CAAATGATTC ACAAAAACCG GGGCTGGGAC TTGTTAAGTT ACAGATTCCG TTGCTTGGGA TGAAAGAGTC AAATTGGGCC AGAATTGCAT CCTTTATGGC CGGAAAAGAA AGAGGGGCTT TTTTTCTTCC TGAAGTGGGT GACGAGGTAC TTGTTGCATT TGAAAACGGG GACGTCAACA AGCCATTTAT TATCGGAGCT TTATGGAATG GAAAAGACAC ACCTCCTGAA AAAAACAGTG ATGGAAAAAA TAACATCAGA GTTATAAAGT CCCGCAGCGG ACATATATTC GAGTTTTCTG ATAAAAGCGG TGAAGAAAGA ATTTTATTGA AATCATCAAA AGGACATATT GTTCAAATTG ATGACAAAAG CGGAGCTGAG AGTATACAAA TTATAGATAA ATCAGGCAGT AACAAACTTA CTATCAGTAC AAAAGATAAT AAAATAACTA TAAATTCAGG AAATATTGAA TTTTCGGCAC CTAACGGAAA ACTTTCAATA AATGCAAAAG ATATAGAAAT AAAATCCTCG GCAGCCACAA AAATTGAAGC TTCAGCCGGA ATTGACATAA AGGCATCCTC TAATATGACA ATTAAAGGAG CTACTGTTAA CATAAACTGA
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Protein sequence | MSEGINISNF TEYIQRDEKV LGVMIGVVIK NDSANDSQKP GLGLVKLQIP LLGMKESNWA RIASFMAGKE RGAFFLPEVG DEVLVAFENG DVNKPFIIGA LWNGKDTPPE KNSDGKNNIR VIKSRSGHIF EFSDKSGEER ILLKSSKGHI VQIDDKSGAE SIQIIDKSGS NKLTISTKDN KITINSGNIE FSAPNGKLSI NAKDIEIKSS AATKIEASAG IDIKASSNMT IKGATVNIN
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