Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1129 |
Symbol | |
ID | 7309939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1387179 |
End bp | 1388327 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643608052 |
Product | carboxynorspermidine decarboxylase |
Protein accession | YP_002505467 |
Protein GI | 220928558 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01047] carboxynorspermidine decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTAAGA ATCTGGATAT TGATATAAAA AGCTTGCCGA CGCCATGCTA CATAGTTGAT GAGCGTCTTC TTATTAAGAA TCTTGAAATT CTGGACTCAG TCCAAAAGCG TACAGGCTGC AAGATACTTC TGGCACAAAA GGGGTTTTCT ATGCACTCTG TTTACCCGTT GGTAGGCAAA TATCTGGCAG GAGTCACTTC AAGCTCTTTG TTTGAGGCAA AACTGGGTTA CGAAAAAATG GGCAAAGAGG TTCATATTTA TGCTCCTGCA TATATTGAAG AAGAGTTTGA TGAAATAATG AAATACAGTG ACCATATAGT ATTCAATTCA TTTCACCAAT GGAACAAATA TAAGGACAAG GTTAGAACAT CAACTAAAAA AATAAGCTTT GGAATCCGTA TAAACCCTGA ATATTCTGAA TTGGAGCATC CCATATATGA CCCTTGCTAT AAATTCTCAA GACTCGGTGT AACCCTTCCC AACTTCAAGC CAGAAGGACT GGACGGTATT GAGGGACTAC ATTTTCATAC AATGTGTGAG CAGAATTCAG ATACACTTGA GAGAACAATA AAAGTAGTTG ATGAAAAATT CGGACGTTAT ATCAAAGATA TGAAATGGTT GAATTTCGGT GGAGGCCATC ATATAACAAG ACCTGATTAC GACATGGAAG CACTTGTACG TTCAATCAAC TATTTCCAGG ACAAATATGG TGTAAGTGTA TATCTGGAGC CCGGAGAAGC GGTTGCATTA AATACGGGTT ATCTGGTAGC AAAGGTACTT GACATCGTTG AAAACGAAAT GAACATTGCA ATACTGGATA CTTCGGCAGC TTGCCATATG CCTGATGTCA TTGAAATGCC CTACAGGCCC AATATAATCG GTGCGGGGAA ACCTGATGAA AACCCGCATA CCTACAGACT TGGAGGACAT ACCTGTCTTG CCGGGGATAT TATCGGGGAC TACTCCTTTG TACAAAACCT GAAGCCCGGT GACAGACTTG TTTTCTGTGA TATGGCACAT TATACAATGG TTAAGAACAA TACCTTTAAC GGAGTAAATC TTCCTGCTAT TGCACTCTAC AATGAAAAGG AAGGAATAAG GATAATAAAG CAGTTTGGCT ATGAGGATTT TGAAAATAGA TTATCGTAA
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Protein sequence | MIKNLDIDIK SLPTPCYIVD ERLLIKNLEI LDSVQKRTGC KILLAQKGFS MHSVYPLVGK YLAGVTSSSL FEAKLGYEKM GKEVHIYAPA YIEEEFDEIM KYSDHIVFNS FHQWNKYKDK VRTSTKKISF GIRINPEYSE LEHPIYDPCY KFSRLGVTLP NFKPEGLDGI EGLHFHTMCE QNSDTLERTI KVVDEKFGRY IKDMKWLNFG GGHHITRPDY DMEALVRSIN YFQDKYGVSV YLEPGEAVAL NTGYLVAKVL DIVENEMNIA ILDTSAACHM PDVIEMPYRP NIIGAGKPDE NPHTYRLGGH TCLAGDIIGD YSFVQNLKPG DRLVFCDMAH YTMVKNNTFN GVNLPAIALY NEKEGIRIIK QFGYEDFENR LS
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