Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0460 |
Symbol | |
ID | 7309339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 528246 |
End bp | 529175 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643607390 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_002504822 |
Protein GI | 220927913 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGGTA TTTTAAATGT TTTAAAGCCG GCCGGAATGA CATCTTTTGA TGTGATTGGG TATATGAGAA AACTAACCGG TCAAAAAAAG ATAGGGCATG CGGGTACACT AGATCCATCG GCTGTCGGAG TTTTACCTTT ATGCATTGGT AATGCCACAA AGGCTTTAGA GTTTATGATA AATAAGGATA AGGTTTACCG TGCGGAACTG ACACTTGGGA TTTCAACCGA TACCCAGGAC TCTTCTGGTA CGGTTTTGTC TTTTCATTCA GTCGACGTAA CTGAAAATGA TATTAAAAAA TCAATAATTA GTTTTATGGG TACTATAGAA CAGCTTCCTC CAATGTATTC TGCAATAAAA ATTGGCGGTA AGAAACTCTA CGAATTAGCA AGACAGGGAC AGACGATAGA ACGGGAATCA AGAACTATTC AAATTTACAA CATAGACATT ATCAGAATTT GGGATGATAG TGAAGTATTT GAATCAGAAG GAATACCACA AGAATTTGCC ATAAAAAAAG TCCTTTTGGA TATTCATTGT TCAAAGGGAA CATATATAAG GACATTATGC CATGATATTG GAGAAAAGCT TGGCTGCGGT GGCCATATGT CATTTCTTGT AAGAACAAGG GCAGGACAGT ACGACCTTGA TAATTCTTTG ACAATTGAAG AAGTCGCCCA ATTGTCAGAA ACTAAATCTC TTGAAGTTCA TTTATTGCCA GTTGAAAAGG TATTTGAAGA GTATGATAGA ATAGAATTGA ACAAGGAAGA ACTTTTCAAG TATAATAACG GAGTATGGCT CGAAGTAGAA AAAAACAAAT ATAAGAATAC CTTTTACAGG GTATATAATA ATAATAGTTT TCTTGGGCTA GGAGAAGTTT TTGAAAAGGG AAATACTCTA TATTTAAAAT CAAAAAAGTT TTTTAAATGA
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Protein sequence | MNGILNVLKP AGMTSFDVIG YMRKLTGQKK IGHAGTLDPS AVGVLPLCIG NATKALEFMI NKDKVYRAEL TLGISTDTQD SSGTVLSFHS VDVTENDIKK SIISFMGTIE QLPPMYSAIK IGGKKLYELA RQGQTIERES RTIQIYNIDI IRIWDDSEVF ESEGIPQEFA IKKVLLDIHC SKGTYIRTLC HDIGEKLGCG GHMSFLVRTR AGQYDLDNSL TIEEVAQLSE TKSLEVHLLP VEKVFEEYDR IELNKEELFK YNNGVWLEVE KNKYKNTFYR VYNNNSFLGL GEVFEKGNTL YLKSKKFFK
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